RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 SLC4A4Q9Y6R1 1079 aa9.81□□□□□ -0.84
RTCB-206ENST00000498434 DOCK2Q92608 1830 aa9.81□□□□□ -0.84
RTCB-206ENST00000498434 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 CCDC196A0A1B0GTZ2 297 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 GOLGA6L3A6NEY3 463 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 POLRMTO00411 1230 aaKnown RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 CPLX1O14810 134 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 LETM1O95202 739 aaPredicted RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 NPR1P16066 1061 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 RCAN1P53805 252 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 KRT85P78386 507 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 SF3B2Q13435 895 aaKnown RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 CAMK2BQ13554 666 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 AKNAD1Q5T1N1 836 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 DZIP1Q86YF9 867 aaKnown RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 SCAND2PQ9GZW5 306 aaPredicted RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 ATP8A2Q9NTI2 1148 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 PODXL2Q9NZ53 605 aa9.8□□□□□ -0.84
RTCB-206ENST00000498434 NAP1L2Q9ULW6 460 aaPredicted RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 ANGEL1Q9UNK9 670 aaKnown RBP9.8□□□□□ -0.84
RTCB-206ENST00000498434 VPS37CA5D8V6 355 aaPredicted RBP9.79□□□□□ -0.84
RTCB-206ENST00000498434 PRPF40AO75400 957 aaKnown RBP9.79□□□□□ -0.84
RTCB-206ENST00000498434 LDHBP07195 334 aaKnown RBP9.79□□□□□ -0.84
RTCB-206ENST00000498434 LIFRP42702 1097 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 EN1Q05925 392 aaPredicted RBP9.79□□□□□ -0.84
RTCB-206ENST00000498434 CCDC178Q5BJE1 867 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 TRIM67Q6ZTA4 783 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 STOX1Q6ZVD7 989 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 SP8Q8IXZ3 490 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 MB21D2Q8IYB1 491 aaPredicted RBP9.79□□□□□ -0.84
RTCB-206ENST00000498434 NECAB1Q8N987 351 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 TMEM87AQ8NBN3 555 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 STAG1Q8WVM7 1258 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 WASF1Q92558 559 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 ANP32BQ92688 251 aaKnown RBP9.79□□□□□ -0.84
RTCB-206ENST00000498434 ESR2Q92731 530 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 ZNF287Q9HBT7 754 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 ANAPC4Q9UJX5 808 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 CFAP45Q9UL16 551 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 SUGT1Q9Y2Z0 365 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 ZDHHC9Q9Y397 364 aa9.79□□□□□ -0.84
RTCB-206ENST00000498434 CCDC69A6NI79 296 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 PDIA3P30101 505 aaKnown RBP9.78□□□□□ -0.84
RTCB-206ENST00000498434 GGCXP38435 758 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 HAND2P61296 217 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 UBE2HP62256 183 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 STK3Q13188 491 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 TTLL5Q6EMB2 1281 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 IQCA1Q86XH1 822 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 TDRD7Q8NHU6 1098 aaKnown RBP9.78□□□□□ -0.84
RTCB-206ENST00000498434 SMARCC2Q8TAQ2 1214 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 NKX2-3Q8TAU0 364 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 EYA3Q99504 573 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 ARMT1Q9H993 441 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 LMBRD1Q9NUN5 540 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 STK32BQ9NY57 414 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 NSFL1CQ9UNZ2 370 aaKnown RBP9.78□□□□□ -0.84
RTCB-206ENST00000498434 A0A1B0GUL6 1792 aa9.78□□□□□ -0.84
RTCB-206ENST00000498434 KLF18A0A0U1RQI7 1052 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 GOLGA8BA8MQT2 603 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 GSG1L2A8MUP6 293 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 SNAP23O00161 211 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 SMAPO00193 183 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 DPYSL4O14531 572 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
RTCB-206ENST00000498434 UFL1O94874 794 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 LARGE1O95461 756 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 CHGBP05060 677 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 YY1P25490 414 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 MRE11P49959 708 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 APLP1P51693 650 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 PDE4BQ07343 736 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 APOBRQ0VD83 1088 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 CHAF1AQ13111 956 aaPredicted RBP9.77□□□□□ -0.85
RTCB-206ENST00000498434 PKP1Q13835 747 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
RTCB-206ENST00000498434 SLFNL1Q499Z3 407 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 NSUN4Q96CB9 384 aaKnown RBP9.77□□□□□ -0.85
RTCB-206ENST00000498434 MASTLQ96GX5 879 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 TCEANC2Q96MN5 208 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 ZNF396Q96N95 335 aaPredicted RBP9.77□□□□□ -0.85
RTCB-206ENST00000498434 UBAC1Q9BSL1 405 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 TMUB1Q9BVT8 246 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 ARPP21Q9UBL0 812 aaPredicted RBP9.77□□□□□ -0.85
RTCB-206ENST00000498434 MTMR6Q9Y217 621 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 CASZ1Q86V15 1759 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 LAMA4Q16363 1823 aa9.77□□□□□ -0.85
RTCB-206ENST00000498434 MYH13Q9UKX3 1938 aa9.76□□□□□ -0.85
RTCB-206ENST00000498434 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
RTCB-206ENST00000498434 IFIT3O14879 490 aaKnown RBP9.76□□□□□ -0.85
RTCB-206ENST00000498434 FOXP2O15409 715 aa9.76□□□□□ -0.85
RTCB-206ENST00000498434 ZBTB43O43298 467 aa9.76□□□□□ -0.85
RTCB-206ENST00000498434 CALM1P0DP23 149 aa9.76□□□□□ -0.85
RTCB-206ENST00000498434 CALM2P0DP24 149 aa9.76□□□□□ -0.85
RTCB-206ENST00000498434 CALM3P0DP25 149 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms