RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 RARSP54136 660 aaKnown RBP26.89■■□□□ 1.9
CLIC4-204ENST00000497755 PI16Q6UXB8 463 aa26.89■■□□□ 1.9
CLIC4-204ENST00000497755 COA7Q96BR5 231 aa26.89■■□□□ 1.9
CLIC4-204ENST00000497755 OSBPL5Q9H0X9 879 aaPredicted RBP26.89■■□□□ 1.9
CLIC4-204ENST00000497755 PAK6Q9NQU5 681 aaPredicted RBP26.89■■□□□ 1.9
CLIC4-204ENST00000497755 LAMA3Q16787 3333 aa26.89■■□□□ 1.89
CLIC4-204ENST00000497755 MAP4K4O95819 1239 aaPredicted RBP26.88■■□□□ 1.89
CLIC4-204ENST00000497755 LDHCP07864 332 aa26.88■■□□□ 1.89
CLIC4-204ENST00000497755 CAPN2P17655 700 aa26.88■■□□□ 1.89
CLIC4-204ENST00000497755 RRP1BQ14684 758 aaKnown RBP26.88■■□□□ 1.89
CLIC4-204ENST00000497755 FAM110CQ1W6H9 321 aa26.88■■□□□ 1.89
CLIC4-204ENST00000497755 SPATA5Q8NB90 893 aa26.88■■□□□ 1.89
CLIC4-204ENST00000497755 PROCA1Q8NCQ7 364 aaPredicted RBP26.88■■□□□ 1.89
CLIC4-204ENST00000497755 ARHGAP45Q92619 1136 aa26.88■■□□□ 1.89
CLIC4-204ENST00000497755 CRISPLD2Q9H0B8 497 aa26.88■■□□□ 1.89
CLIC4-204ENST00000497755 PNMA3Q9UL41 463 aa26.88■■□□□ 1.89
CLIC4-204ENST00000497755 GSTO1P78417 241 aa26.87■■□□□ 1.89
CLIC4-204ENST00000497755 ZNF280CQ8ND82 737 aa26.87■■□□□ 1.89
CLIC4-204ENST00000497755 TAOK2Q9UL54 1235 aa26.87■■□□□ 1.89
CLIC4-204ENST00000497755 EVI5O60447 810 aa26.85■■□□□ 1.89
CLIC4-204ENST00000497755 CAP2P40123 477 aa26.85■■□□□ 1.89
CLIC4-204ENST00000497755 ARID4AP29374 1257 aaPredicted RBP26.84■■□□□ 1.89
CLIC4-204ENST00000497755 GCLCP48506 637 aaPredicted RBP26.84■■□□□ 1.89
CLIC4-204ENST00000497755 HMGCS2P54868 508 aa26.84■■□□□ 1.89
CLIC4-204ENST00000497755 GORABQ5T7V8 394 aa26.84■■□□□ 1.89
CLIC4-204ENST00000497755 PAWRQ96IZ0 340 aaKnown RBP26.84■■□□□ 1.89
CLIC4-204ENST00000497755 RAI14Q9P0K7 980 aa26.84■■□□□ 1.89
CLIC4-204ENST00000497755 GJD2Q9UKL4 321 aa26.84■■□□□ 1.89
CLIC4-204ENST00000497755 COL2A1P02458 1487 aaPredicted RBP26.84■■□□□ 1.89
CLIC4-204ENST00000497755 TBC1D2Q9BYX2 928 aa26.83■■□□□ 1.89
CLIC4-204ENST00000497755 ASCC2Q9H1I8 757 aaPredicted RBP26.83■■□□□ 1.89
CLIC4-204ENST00000497755 USP17L5A8MUK1 530 aa26.82■■□□□ 1.88
CLIC4-204ENST00000497755 MCAMP43121 646 aa26.82■■□□□ 1.88
CLIC4-204ENST00000497755 SH3D19Q5HYK7 790 aa26.82■■□□□ 1.88
CLIC4-204ENST00000497755 TEX11Q8IYF3 940 aa26.82■■□□□ 1.88
CLIC4-204ENST00000497755 LOC285556D6RIA3 1793 aa26.81■■□□□ 1.88
CLIC4-204ENST00000497755 PABPC4Q13310 644 aaKnown RBP eCLIP26.81■■□□□ 1.88
CLIC4-204ENST00000497755 SH3RF3Q8TEJ3 882 aaPredicted RBP26.81■■□□□ 1.88
CLIC4-204ENST00000497755 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.81■■□□□ 1.885e-6■■□□□ 13.3
CLIC4-204ENST00000497755 HERC5Q9UII4 1024 aaKnown RBP26.81■■□□□ 1.88
CLIC4-204ENST00000497755 ATAD5Q96QE3 1844 aa26.81■■□□□ 1.88
CLIC4-204ENST00000497755 PNMA6EA0A0J9YXQ4 647 aa26.8■■□□□ 1.88
CLIC4-204ENST00000497755 DIS3LQ8TF46 1054 aaKnown RBP26.8■■□□□ 1.88
CLIC4-204ENST00000497755 LRP2BPQ9P2M1 347 aa26.8■■□□□ 1.88
CLIC4-204ENST00000497755 PI4KBQ9UBF8 816 aa26.8■■□□□ 1.88
CLIC4-204ENST00000497755 STAP2Q9UGK3 403 aa26.8■■□□□ 1.88
CLIC4-204ENST00000497755 GNAI2P04899 355 aa26.79■■□□□ 1.88
CLIC4-204ENST00000497755 G3BP1Q13283 466 aaKnown RBP eCLIP26.79■■□□□ 1.88
CLIC4-204ENST00000497755 NECAB2Q7Z6G3 386 aa26.79■■□□□ 1.88
CLIC4-204ENST00000497755 ALPK3Q96L96 1907 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 A0A1W2PPC1 479 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 HMGCRP04035 888 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 UQCRFS1P1P0C7P4 283 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 JAG1P78504 1218 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 TRIM32Q13049 653 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 WDR18Q9BV38 432 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 AS3MTQ9HBK9 375 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 TNNQ9UQP3 1299 aa26.78■■□□□ 1.88
CLIC4-204ENST00000497755 COL6A3P12111 3177 aa26.77■■□□□ 1.88
CLIC4-204ENST00000497755 DHX36Q9H2U1 1008 aaKnown RBP26.77■■□□□ 1.88
CLIC4-204ENST00000497755 MORF4L1Q9UBU8 362 aa26.77■■□□□ 1.88
CLIC4-204ENST00000497755 RPTORQ8N122 1335 aa26.76■■□□□ 1.87
CLIC4-204ENST00000497755 TRIM27P14373 513 aa26.76■■□□□ 1.87
CLIC4-204ENST00000497755 ANKLE1Q8NAG6 615 aa26.76■■□□□ 1.87
CLIC4-204ENST00000497755 SNRKQ9NRH2 765 aa26.76■■□□□ 1.87
CLIC4-204ENST00000497755 AATFQ9NY61 560 aaKnown RBP eCLIP26.76■■□□□ 1.87
CLIC4-204ENST00000497755 SOX1O00570 391 aaPredicted RBP26.75■■□□□ 1.87
CLIC4-204ENST00000497755 IPO8O15397 1037 aaKnown RBP26.75■■□□□ 1.87
CLIC4-204ENST00000497755 HOXA7P31268 230 aaPredicted RBP26.75■■□□□ 1.87
CLIC4-204ENST00000497755 MNX1P50219 401 aaPredicted RBP26.75■■□□□ 1.87
CLIC4-204ENST00000497755 BACE1P56817 501 aa26.75■■□□□ 1.87
CLIC4-204ENST00000497755 PPP4CP60510 307 aa26.75■■□□□ 1.87
CLIC4-204ENST00000497755 MTMR2Q13614 643 aa26.75■■□□□ 1.87
CLIC4-204ENST00000497755 P2RX7Q99572 595 aaKnown RBP26.75■■□□□ 1.87
CLIC4-204ENST00000497755 HMX1Q9NP08 348 aaPredicted RBP26.75■■□□□ 1.87
CLIC4-204ENST00000497755 PLXNB2O15031 1838 aa26.74■■□□□ 1.87
CLIC4-204ENST00000497755 BAG3O95817 575 aa26.74■■□□□ 1.87
CLIC4-204ENST00000497755 NAA16Q6N069 864 aaPredicted RBP26.74■■□□□ 1.87
CLIC4-204ENST00000497755 METTL16Q86W50 562 aaKnown RBP26.74■■□□□ 1.87
CLIC4-204ENST00000497755 FOXP4Q8IVH2 680 aaPredicted RBP26.74■■□□□ 1.87
CLIC4-204ENST00000497755 TGFBRAP1Q8WUH2 860 aa26.74■■□□□ 1.87
CLIC4-204ENST00000497755 NOL10Q9BSC4 688 aaKnown RBP26.74■■□□□ 1.87
CLIC4-204ENST00000497755 DNAJC18Q9H819 358 aa26.74■■□□□ 1.87
CLIC4-204ENST00000497755 SIPA1L1O43166 1804 aa26.74■■□□□ 1.87
CLIC4-204ENST00000497755 PEX10O60683 326 aa26.73■■□□□ 1.87
CLIC4-204ENST00000497755 ASNSP08243 561 aa26.73■■□□□ 1.87
CLIC4-204ENST00000497755 ATF7IPQ6VMQ6 1270 aa26.73■■□□□ 1.87
CLIC4-204ENST00000497755 ADGRA1Q86SQ6 560 aa26.73■■□□□ 1.87
CLIC4-204ENST00000497755 TRIB2Q92519 343 aa26.73■■□□□ 1.87
CLIC4-204ENST00000497755 BCAR3O75815 825 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 IRX3P78415 501 aaPredicted RBP26.72■■□□□ 1.87
CLIC4-204ENST00000497755 SHROOM1Q2M3G4 852 aaPredicted RBP26.72■■□□□ 1.87
CLIC4-204ENST00000497755 MAPKAPK5Q8IW41 473 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 LRCH3Q96II8 777 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 GDF15Q99988 308 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 NBPF3Q9H094 633 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 TXNRD2Q9NNW7 524 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 GPR108Q9NPR9 543 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 TMOD4Q9NZQ9 345 aa26.72■■□□□ 1.87
CLIC4-204ENST00000497755 A0A0C4DFX4 3053 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms