RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ITIH2P19823 946 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 ATP2B2Q01814 1243 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 SCARA3Q6AZY7 606 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 DNAJC14Q6Y2X3 702 aaPredicted RBP6.8□□□□□ -1.32
CD46-218ENST00000496723 ZSWIM9Q86XI8 627 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 GPBAR1Q8TDU6 330 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 ACSBG1Q96GR2 724 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 FAM84AQ96KN4 292 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 PRDM10Q9NQV6 1147 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 AKAP2Q9Y2D5 859 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 SAMM50Q9Y512 469 aa6.8□□□□□ -1.32
CD46-218ENST00000496723 LDHBP07195 334 aaKnown RBP6.79□□□□□ -1.32
CD46-218ENST00000496723 FBLN7Q53RD9 439 aa6.79□□□□□ -1.32
CD46-218ENST00000496723 ALG1LQ6GMV1 187 aa6.79□□□□□ -1.32
CD46-218ENST00000496723 FBF1Q8TES7 1133 aa6.79□□□□□ -1.32
CD46-218ENST00000496723 LRRC10BA6NIK2 292 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 FANCGO15287 622 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 CLCN7P51798 805 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 MESP2Q0VG99 397 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 IKZF1Q13422 519 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 SPACA3Q8IXA5 215 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 KCT2Q8NC54 265 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 NECAB3Q96P71 396 aaPredicted RBP6.78□□□□□ -1.32
CD46-218ENST00000496723 CEP44Q9C0F1 390 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 LMCD1Q9NZU5 365 aa6.78□□□□□ -1.32
CD46-218ENST00000496723 TRIM37O94972 964 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 NTF4P34130 210 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 ZP2Q05996 745 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 RING1Q06587 406 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 KCNMB1Q16558 191 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 NXPE4Q6UWF7 544 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 C3orf58Q8NDZ4 430 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 SRCIN1Q9C0H9 1055 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 CBX8Q9HC52 389 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 PPM1HQ9ULR3 514 aa6.77□□□□□ -1.33
CD46-218ENST00000496723 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 GSTT1P30711 240 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 AFMP43652 599 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 NKPD1Q17RQ9 610 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 EAPPQ56P03 285 aaPredicted RBP6.76□□□□□ -1.33
CD46-218ENST00000496723 PPM1JQ5JR12 505 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 CDC37L1Q7L3B6 337 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 NPAS4Q8IUM7 802 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 PICK1Q9NRD5 415 aa6.76□□□□□ -1.33
CD46-218ENST00000496723 ZNF503-AS2A6NEH8 195 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 BMP6P22004 513 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 LRRC14Q15048 493 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 ZBTB37Q5TC79 503 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 ANKRD24Q8TF21 1146 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 PRDM7Q9NQW5 492 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 CTNND2Q9UQB3 1225 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 MAPK8IP1Q9UQF2 711 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 PITPNM2Q9BZ72 1349 aa6.75□□□□□ -1.33
CD46-218ENST00000496723 PRPF40AO75400 957 aaKnown RBP6.74□□□□□ -1.33
CD46-218ENST00000496723 TMCO4Q5TGY1 634 aa6.74□□□□□ -1.33
CD46-218ENST00000496723 PPP1R16BQ96T49 567 aa6.74□□□□□ -1.33
CD46-218ENST00000496723 OSBPL7Q9BZF2 842 aa6.74□□□□□ -1.33
CD46-218ENST00000496723 FOXQ1Q9C009 403 aa6.74□□□□□ -1.33
CD46-218ENST00000496723 PRDM5Q9NQX1 630 aaPredicted RBP6.74□□□□□ -1.33
CD46-218ENST00000496723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD46-218ENST00000496723 SPG7Q9UQ90 795 aa6.74□□□□□ -1.33
CD46-218ENST00000496723 ENC1O14682 589 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 GIPC1O14908 333 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 LRIG2O94898 1065 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 EOMESO95936 686 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 ERCC3P19447 782 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 LLGL2Q6P1M3 1020 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 C12orf40Q86WS4 652 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 DUSP9Q99956 384 aaKnown RBP6.73□□□□□ -1.33
CD46-218ENST00000496723 CYP8B1Q9UNU6 501 aa6.73□□□□□ -1.33
CD46-218ENST00000496723 DCDC2CA8MYV0 355 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 TSPAN15O95858 294 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 RAP1GAPP47736 663 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 FGD1P98174 961 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 TRIM26Q12899 539 aaPredicted RBP6.72□□□□□ -1.33
CD46-218ENST00000496723 MLANAQ16655 118 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 LCE4AQ5TA78 99 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 MPRIPQ6WCQ1 1025 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 C22orf34Q6ZV56 151 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 ZNF507Q8TCN5 953 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 TOX2Q96NM4 488 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 RNF19AQ9NV58 838 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 CSADQ9Y600 493 aa6.72□□□□□ -1.33
CD46-218ENST00000496723 GLI1P08151 1106 aa6.71□□□□□ -1.34
CD46-218ENST00000496723 GNA15P30679 374 aa6.71□□□□□ -1.34
CD46-218ENST00000496723 CYFIP1Q7L576 1253 aa6.71□□□□□ -1.34
CD46-218ENST00000496723 C12orf49Q9H741 205 aa6.71□□□□□ -1.34
CD46-218ENST00000496723 PCDHA4Q9UN74 947 aa6.71□□□□□ -1.34
CD46-218ENST00000496723 PAGE1O75459 146 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 CAP2P40123 477 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 UBE3DQ7Z6J8 389 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 FBXO33Q7Z6M2 555 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 CILP2Q8IUL8 1156 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 ELMO3Q96BJ8 720 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms