RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ARID4AP29374 1257 aaPredicted RBP18.04■□□□□ 0.48
PCCB-219ENST00000494742 GCLCP48506 637 aaPredicted RBP18.04■□□□□ 0.48
PCCB-219ENST00000494742 ZNF280CQ8ND82 737 aa18.04■□□□□ 0.48
PCCB-219ENST00000494742 TRIOBPQ9H2D6 2365 aa18.04■□□□□ 0.48
PCCB-219ENST00000494742 SLURP2P0DP57 97 aa18.03■□□□□ 0.48
PCCB-219ENST00000494742 ELNP15502 786 aa18.03■□□□□ 0.48
PCCB-219ENST00000494742 CAP2P40123 477 aa18.03■□□□□ 0.48
PCCB-219ENST00000494742 ANKRD13CQ8N6S4 541 aa18.03■□□□□ 0.48
PCCB-219ENST00000494742 PRO3102Q9H379 93 aa18.03■□□□□ 0.48
PCCB-219ENST00000494742 PAK6Q9NQU5 681 aaPredicted RBP18.03■□□□□ 0.48
PCCB-219ENST00000494742 RBM27Q9P2N5 1060 aaKnown RBP18.03■□□□□ 0.48
PCCB-219ENST00000494742 HERC5Q9UII4 1024 aaKnown RBP18.03■□□□□ 0.48
PCCB-219ENST00000494742 IGSF3O75054 1194 aa18.02■□□□□ 0.48
PCCB-219ENST00000494742 GNAI2P04899 355 aa18.02■□□□□ 0.48
PCCB-219ENST00000494742 UQCRFS1P1P0C7P4 283 aa18.02■□□□□ 0.48
PCCB-219ENST00000494742 SPP2Q13103 211 aa18.02■□□□□ 0.48
PCCB-219ENST00000494742 SH3D19Q5HYK7 790 aa18.02■□□□□ 0.48
PCCB-219ENST00000494742 TREML2Q5T2D2 321 aa18.02■□□□□ 0.48
PCCB-219ENST00000494742 CRISPLD2Q9H0B8 497 aa18.02■□□□□ 0.48
PCCB-219ENST00000494742 DHX36Q9H2U1 1008 aaKnown RBP18.02■□□□□ 0.48
PCCB-219ENST00000494742 A0A1W2PPC1 479 aa18.01■□□□□ 0.47
PCCB-219ENST00000494742 USP17L5A8MUK1 530 aa18.01■□□□□ 0.47
PCCB-219ENST00000494742 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
PCCB-219ENST00000494742 TFRCP02786 760 aaKnown RBP18.01■□□□□ 0.47
PCCB-219ENST00000494742 G3BP1Q13283 466 aaKnown RBP eCLIP18.01■□□□□ 0.472e-6■■■■□ 23.6
PCCB-219ENST00000494742 DEFB118Q96PH6 123 aa18.01■□□□□ 0.47
PCCB-219ENST00000494742 AS3MTQ9HBK9 375 aa18.01■□□□□ 0.47
PCCB-219ENST00000494742 RAI14Q9P0K7 980 aa18.01■□□□□ 0.47
PCCB-219ENST00000494742 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.01■□□□□ 0.47
PCCB-219ENST00000494742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.01■□□□□ 0.47
PCCB-219ENST00000494742 DOCK3Q8IZD9 2030 aa18.01■□□□□ 0.47
PCCB-219ENST00000494742 MAST2Q6P0Q8 1798 aa18■□□□□ 0.47
PCCB-219ENST00000494742 EVI5O60447 810 aa18■□□□□ 0.47
PCCB-219ENST00000494742 PI16Q6UXB8 463 aa18■□□□□ 0.47
PCCB-219ENST00000494742 TBC1D9Q6ZT07 1266 aa18■□□□□ 0.47
PCCB-219ENST00000494742 CCDC84Q86UT8 332 aaPredicted RBP18■□□□□ 0.47
PCCB-219ENST00000494742 NOL10Q9BSC4 688 aaKnown RBP18■□□□□ 0.47
PCCB-219ENST00000494742 LRP2BPQ9P2M1 347 aa18■□□□□ 0.47
PCCB-219ENST00000494742 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
PCCB-219ENST00000494742 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 BAG3O95817 575 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 PLCG2P16885 1265 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 MCAMP43121 646 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 HMGCS2P54868 508 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 TEX11Q8IYF3 940 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 ANKLE1Q8NAG6 615 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 GPR108Q9NPR9 543 aa17.99■□□□□ 0.47
PCCB-219ENST00000494742 HMGCRP04035 888 aa17.98■□□□□ 0.47
PCCB-219ENST00000494742 TRIM27P14373 513 aa17.98■□□□□ 0.47
PCCB-219ENST00000494742 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
PCCB-219ENST00000494742 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCCB-219ENST00000494742 ASCC2Q9H1I8 757 aaPredicted RBP17.98■□□□□ 0.47
PCCB-219ENST00000494742 GINM1Q9NU53 330 aa17.98■□□□□ 0.47
PCCB-219ENST00000494742 MORF4L1Q9UBU8 362 aa17.98■□□□□ 0.47
PCCB-219ENST00000494742 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
PCCB-219ENST00000494742 FOCADQ5VW36 1801 aa17.98■□□□□ 0.47
PCCB-219ENST00000494742 RANBP2P49792 3224 aaKnown RBP17.97■□□□□ 0.47
PCCB-219ENST00000494742 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
PCCB-219ENST00000494742 CCER2I3L3R5 266 aa17.97■□□□□ 0.47
PCCB-219ENST00000494742 ASNSP08243 561 aa17.97■□□□□ 0.47
PCCB-219ENST00000494742 PPP4CP60510 307 aa17.97■□□□□ 0.47
PCCB-219ENST00000494742 NECAB2Q7Z6G3 386 aa17.97■□□□□ 0.47
PCCB-219ENST00000494742 METTL16Q86W50 562 aaKnown RBP17.97■□□□□ 0.47
PCCB-219ENST00000494742 FOXP4Q8IVH2 680 aaPredicted RBP17.97■□□□□ 0.47
PCCB-219ENST00000494742 SH3RF3Q8TEJ3 882 aaPredicted RBP17.97■□□□□ 0.47
PCCB-219ENST00000494742 GJD2Q9UKL4 321 aa17.97■□□□□ 0.47
PCCB-219ENST00000494742 SIPA1L1O43166 1804 aa17.97■□□□□ 0.47
PCCB-219ENST00000494742 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
PCCB-219ENST00000494742 HOXA7P31268 230 aaPredicted RBP17.96■□□□□ 0.47
PCCB-219ENST00000494742 BACE1P56817 501 aa17.96■□□□□ 0.47
PCCB-219ENST00000494742 RRP1BQ14684 758 aaKnown RBP17.96■□□□□ 0.47
PCCB-219ENST00000494742 CCDC158Q5M9N0 1113 aa17.96■□□□□ 0.47
PCCB-219ENST00000494742 NAA16Q6N069 864 aaPredicted RBP17.96■□□□□ 0.47
PCCB-219ENST00000494742 PAWRQ96IZ0 340 aaKnown RBP17.96■□□□□ 0.47
PCCB-219ENST00000494742 ZNF512BQ96KM6 892 aaPredicted RBP17.96■□□□□ 0.47
PCCB-219ENST00000494742 CDK5RAP2Q96SN8 1893 aa17.96■□□□□ 0.47
PCCB-219ENST00000494742 RPTORQ8N122 1335 aa17.96■□□□□ 0.46
PCCB-219ENST00000494742 SZT2Q5T011 3432 aa17.95■□□□□ 0.46
PCCB-219ENST00000494742 HMX1Q9NP08 348 aaPredicted RBP17.95■□□□□ 0.46
PCCB-219ENST00000494742 TMOD4Q9NZQ9 345 aa17.95■□□□□ 0.46
PCCB-219ENST00000494742 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
PCCB-219ENST00000494742 IRX3P78415 501 aaPredicted RBP17.94■□□□□ 0.46
PCCB-219ENST00000494742 TNNI3KQ59H18 835 aa17.94■□□□□ 0.46
PCCB-219ENST00000494742 TTC39AQ5SRH9 613 aa17.94■□□□□ 0.46
PCCB-219ENST00000494742 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.46
PCCB-219ENST00000494742 FPGT-TNNI3KV9GXZ4 949 aa17.94■□□□□ 0.46
PCCB-219ENST00000494742 ALPK3Q96L96 1907 aa17.94■□□□□ 0.46
PCCB-219ENST00000494742 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
PCCB-219ENST00000494742 MTMR2Q13614 643 aa17.93■□□□□ 0.46
PCCB-219ENST00000494742 POLA2Q14181 598 aa17.93■□□□□ 0.46
PCCB-219ENST00000494742 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
PCCB-219ENST00000494742 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
PCCB-219ENST00000494742 TGFBRAP1Q8WUH2 860 aa17.93■□□□□ 0.46
PCCB-219ENST00000494742 SOCS4Q8WXH5 440 aa17.93■□□□□ 0.46
PCCB-219ENST00000494742 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
PCCB-219ENST00000494742 TRIM34Q9BYJ4 488 aa17.93■□□□□ 0.46
PCCB-219ENST00000494742 FLT1P17948 1338 aa17.93■□□□□ 0.46
PCCB-219ENST00000494742 USP17L10C9JJH3 530 aa17.92■□□□□ 0.46
PCCB-219ENST00000494742 CRACR2BQ8N4Y2 399 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms