RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 TREML2Q5T2D2 321 aa25.46■■□□□ 1.67
PHTF1-212ENST00000493212 PROCA1Q8NCQ7 364 aaPredicted RBP25.46■■□□□ 1.67
PHTF1-212ENST00000493212 SLAIN1Q8ND83 568 aa25.46■■□□□ 1.67
PHTF1-212ENST00000493212 LRP2BPQ9P2M1 347 aa25.46■■□□□ 1.67
PHTF1-212ENST00000493212 ATAD5Q96QE3 1844 aa25.46■■□□□ 1.67
PHTF1-212ENST00000493212 CAP2P40123 477 aa25.45■■□□□ 1.66
PHTF1-212ENST00000493212 TEX11Q8IYF3 940 aa25.45■■□□□ 1.66
PHTF1-212ENST00000493212 NKX2-3Q8TAU0 364 aa25.45■■□□□ 1.66
PHTF1-212ENST00000493212 SH3RF3Q8TEJ3 882 aaPredicted RBP25.45■■□□□ 1.66
PHTF1-212ENST00000493212 DBNDD2Q9BQY9 259 aa25.45■■□□□ 1.66
PHTF1-212ENST00000493212 SMCR8Q8TEV9 937 aaPredicted RBP25.44■■□□□ 1.66
PHTF1-212ENST00000493212 ZNF512BQ96KM6 892 aaPredicted RBP25.44■■□□□ 1.66
PHTF1-212ENST00000493212 TBC1D2Q9BYX2 928 aa25.44■■□□□ 1.66
PHTF1-212ENST00000493212 HERC5Q9UII4 1024 aaKnown RBP25.44■■□□□ 1.66
PHTF1-212ENST00000493212 CYP2E1P05181 493 aaPredicted RBP25.43■■□□□ 1.66
PHTF1-212ENST00000493212 FLT3LGP49771 235 aa25.43■■□□□ 1.66
PHTF1-212ENST00000493212 PPP4CP60510 307 aa25.43■■□□□ 1.66
PHTF1-212ENST00000493212 UBXN2AP68543 259 aa25.43■■□□□ 1.66
PHTF1-212ENST00000493212 SPP2Q13103 211 aa25.43■■□□□ 1.66
PHTF1-212ENST00000493212 IRF5Q13568 498 aa25.43■■□□□ 1.66
PHTF1-212ENST00000493212 ZNF280CQ8ND82 737 aa25.43■■□□□ 1.66
PHTF1-212ENST00000493212 SNRKQ9NRH2 765 aa25.43■■□□□ 1.66
PHTF1-212ENST00000493212 NOP58Q9Y2X3 529 aaKnown RBP25.43■■□□□ 1.66
PHTF1-212ENST00000493212 FAM110CQ1W6H9 321 aa25.42■■□□□ 1.66
PHTF1-212ENST00000493212 TTC39AQ5SRH9 613 aa25.42■■□□□ 1.66
PHTF1-212ENST00000493212 NAA16Q6N069 864 aaPredicted RBP25.42■■□□□ 1.66
PHTF1-212ENST00000493212 ADGRA1Q86SQ6 560 aa25.42■■□□□ 1.66
PHTF1-212ENST00000493212 PXYLP1Q8TE99 480 aa25.42■■□□□ 1.66
PHTF1-212ENST00000493212 RNF208Q9H0X6 261 aa25.42■■□□□ 1.66
PHTF1-212ENST00000493212 AATFQ9NY61 560 aaKnown RBP eCLIP25.42■■□□□ 1.66
PHTF1-212ENST00000493212 CDK5RAP2Q96SN8 1893 aa25.42■■□□□ 1.66
PHTF1-212ENST00000493212 FOCADQ5VW36 1801 aa25.42■■□□□ 1.66
PHTF1-212ENST00000493212 H0YGN5 161 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 ADCY3O60266 1144 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 IGSF3O75054 1194 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 SH3D19Q5HYK7 790 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 CCDC158Q5M9N0 1113 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 METTL16Q86W50 562 aaKnown RBP25.41■■□□□ 1.66
PHTF1-212ENST00000493212 ANKRD13CQ8N6S4 541 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 DHX36Q9H2U1 1008 aaKnown RBP25.41■■□□□ 1.66
PHTF1-212ENST00000493212 PI4KBQ9UBF8 816 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 PNMA3Q9UL41 463 aa25.41■■□□□ 1.66
PHTF1-212ENST00000493212 MYO5AQ9Y4I1 1855 aaKnown RBP25.4■■□□□ 1.66
PHTF1-212ENST00000493212 CEP290O15078 2479 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 USP17L5A8MUK1 530 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 TNPO2O14787 897 aaKnown RBP25.4■■□□□ 1.66
PHTF1-212ENST00000493212 ZBTB7BO15156 539 aaPredicted RBP25.4■■□□□ 1.66
PHTF1-212ENST00000493212 SURF6O75683 361 aaKnown RBP25.4■■□□□ 1.66
PHTF1-212ENST00000493212 BAG3O95817 575 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 RLBP1P12271 317 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 PLCG2P16885 1265 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 UNC93B1Q9H1C4 597 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 C1orf115Q9H7X2 142 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 DNAJC18Q9H819 358 aa25.4■■□□□ 1.66
PHTF1-212ENST00000493212 BIN2Q9UBW5 565 aaPredicted RBP25.4■■□□□ 1.66
PHTF1-212ENST00000493212 COLQQ9Y215 455 aaPredicted RBP25.4■■□□□ 1.66
PHTF1-212ENST00000493212 FXR1P51114 621 aaKnown RBP eCLIP25.39■■□□□ 1.66
PHTF1-212ENST00000493212 HMGCS2P54868 508 aa25.39■■□□□ 1.66
PHTF1-212ENST00000493212 U2AF1L4Q8WU68 220 aaKnown RBP25.39■■□□□ 1.66
PHTF1-212ENST00000493212 NOL10Q9BSC4 688 aaKnown RBP25.39■■□□□ 1.66
PHTF1-212ENST00000493212 DBNLQ9UJU6 430 aaKnown RBP25.39■■□□□ 1.66
PHTF1-212ENST00000493212 FLT1P17948 1338 aa25.38■■□□□ 1.65
PHTF1-212ENST00000493212 ELNP15502 786 aa25.38■■□□□ 1.65
PHTF1-212ENST00000493212 ZAP70P43403 619 aa25.38■■□□□ 1.65
PHTF1-212ENST00000493212 TGFBRAP1Q8WUH2 860 aa25.38■■□□□ 1.65
PHTF1-212ENST00000493212 WDR18Q9BV38 432 aa25.38■■□□□ 1.65
PHTF1-212ENST00000493212 DOCK3Q8IZD9 2030 aa25.37■■□□□ 1.65
PHTF1-212ENST00000493212 INHAP05111 366 aa25.37■■□□□ 1.65
PHTF1-212ENST00000493212 GCLCP48506 637 aaPredicted RBP25.37■■□□□ 1.65
PHTF1-212ENST00000493212 JAG1P78504 1218 aa25.37■■□□□ 1.65
PHTF1-212ENST00000493212 OS9Q13438 667 aaPredicted RBP25.37■■□□□ 1.65
PHTF1-212ENST00000493212 ASCC2Q9H1I8 757 aaPredicted RBP25.37■■□□□ 1.65
PHTF1-212ENST00000493212 PIH1D3Q9NQM4 214 aaKnown RBP25.37■■□□□ 1.65
PHTF1-212ENST00000493212 TLR7Q9NYK1 1049 aaKnown RBP25.37■■□□□ 1.65
PHTF1-212ENST00000493212 SGPL1O95470 568 aa25.36■■□□□ 1.65
PHTF1-212ENST00000493212 MAPKAPK5Q8IW41 473 aa25.36■■□□□ 1.65
PHTF1-212ENST00000493212 AS3MTQ9HBK9 375 aa25.36■■□□□ 1.65
PHTF1-212ENST00000493212 PABPC4Q13310 644 aaKnown RBP eCLIP25.35■■□□□ 1.65
PHTF1-212ENST00000493212 FOXP4Q8IVH2 680 aaPredicted RBP25.35■■□□□ 1.65
PHTF1-212ENST00000493212 ITPRIPQ8IWB1 547 aa25.35■■□□□ 1.65
PHTF1-212ENST00000493212 FTSJ3Q8IY81 847 aaKnown RBP25.35■■□□□ 1.65
PHTF1-212ENST00000493212 COA7Q96BR5 231 aa25.35■■□□□ 1.65
PHTF1-212ENST00000493212 EAF2Q96CJ1 260 aaPredicted RBP25.35■■□□□ 1.65
PHTF1-212ENST00000493212 PAK6Q9NQU5 681 aaPredicted RBP25.35■■□□□ 1.65
PHTF1-212ENST00000493212 ASNSP08243 561 aa25.34■■□□□ 1.65
PHTF1-212ENST00000493212 BACE1P56817 501 aa25.34■■□□□ 1.65
PHTF1-212ENST00000493212 HNRNPUQ00839 825 aaKnown RBP eCLIP25.34■■□□□ 1.65
PHTF1-212ENST00000493212 PALD1Q9ULE6 856 aa25.34■■□□□ 1.65
PHTF1-212ENST00000493212 MTMR2Q13614 643 aa25.33■■□□□ 1.65
PHTF1-212ENST00000493212 SHROOM1Q2M3G4 852 aaPredicted RBP25.33■■□□□ 1.65
PHTF1-212ENST00000493212 CCDC8Q9H0W5 538 aaPredicted RBP25.33■■□□□ 1.65
PHTF1-212ENST00000493212 GINM1Q9NU53 330 aa25.33■■□□□ 1.65
PHTF1-212ENST00000493212 MORF4L1Q9UBU8 362 aa25.33■■□□□ 1.65
PHTF1-212ENST00000493212 GJD2Q9UKL4 321 aa25.33■■□□□ 1.65
PHTF1-212ENST00000493212 RANBP2P49792 3224 aaKnown RBP25.32■■□□□ 1.64
PHTF1-212ENST00000493212 FARP2O94887 1054 aaPredicted RBP25.32■■□□□ 1.64
PHTF1-212ENST00000493212 CAPN2P17655 700 aa25.32■■□□□ 1.64
PHTF1-212ENST00000493212 HOXA7P31268 230 aaPredicted RBP25.32■■□□□ 1.64
PHTF1-212ENST00000493212 DYNLL1P63167 89 aaKnown RBP25.32■■□□□ 1.64
PHTF1-212ENST00000493212 CEP85Q6P2H3 762 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms