RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MYH8P13535 1937 aa22.11■■□□□ 1.13
MCF2L-230ENST00000491028 NT5C2P49902 561 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 CTDSPL2Q05D32 466 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 AKNAD1Q5T1N1 836 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 KRT26Q7Z3Y9 468 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 TBC1D10CQ8IV04 446 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 IL17RAQ96F46 866 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 ZNF287Q9HBT7 754 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 HERC5Q9UII4 1024 aaKnown RBP22.1■■□□□ 1.13
MCF2L-230ENST00000491028 SERPINB13Q9UIV8 391 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 CLEC11AQ9Y240 323 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 SNX14Q9Y5W7 946 aa22.1■■□□□ 1.13
MCF2L-230ENST00000491028 GABPAQ06546 454 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 PDE4BQ07343 736 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 SLC4A8Q2Y0W8 1093 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 C16orf86Q6ZW13 317 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 CDC37L1Q7L3B6 337 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 METTL16Q86W50 562 aaKnown RBP22.09■■□□□ 1.13
MCF2L-230ENST00000491028 FOXP4Q8IVH2 680 aaPredicted RBP22.09■■□□□ 1.13
MCF2L-230ENST00000491028 RASEFQ8IZ41 740 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 CNNM2Q9H8M5 875 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 SWAP70Q9UH65 585 aa22.09■■□□□ 1.13
MCF2L-230ENST00000491028 E7EWF7 191 aa22.08■■□□□ 1.13
MCF2L-230ENST00000491028 FGRP09769 529 aa22.08■■□□□ 1.13
MCF2L-230ENST00000491028 POTEIP0CG38 1075 aa22.08■■□□□ 1.13
MCF2L-230ENST00000491028 POTEJP0CG39 1038 aa22.08■■□□□ 1.13
MCF2L-230ENST00000491028 MFSD6Q6ZSS7 791 aa22.08■■□□□ 1.13
MCF2L-230ENST00000491028 CRACR2BQ8N4Y2 399 aaPredicted RBP22.08■■□□□ 1.13
MCF2L-230ENST00000491028 TRIM34Q9BYJ4 488 aa22.08■■□□□ 1.13
MCF2L-230ENST00000491028 SCAF8Q9UPN6 1271 aaKnown RBP22.08■■□□□ 1.13
MCF2L-230ENST00000491028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.08■■□□□ 1.13
MCF2L-230ENST00000491028 TBC1D12O60347 775 aa22.07■■□□□ 1.12
MCF2L-230ENST00000491028 EVX2Q03828 476 aa22.07■■□□□ 1.12
MCF2L-230ENST00000491028 TRDNQ13061 729 aa22.07■■□□□ 1.12
MCF2L-230ENST00000491028 TAF6LQ9Y6J9 622 aa22.07■■□□□ 1.12
MCF2L-230ENST00000491028 ADM5C9JUS6 153 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 SMIM22K7EJ46 135 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 ORC4O43929 436 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 C1QTNF8P60827 252 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 SUPT20HL1Q3ZLR7 823 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 STOX1Q6ZVD7 989 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 DYNLL2Q96FJ2 89 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 KRT23Q9C075 422 aa22.06■■□□□ 1.12
MCF2L-230ENST00000491028 PSMA5P28066 241 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 CDK8P49336 464 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 MAP3K10Q02779 954 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 DCAF15Q66K64 600 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 RALYLQ86SE5 291 aaKnown RBP22.05■■□□□ 1.12
MCF2L-230ENST00000491028 CDAN1Q8IWY9 1227 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 NCOA7Q8NI08 942 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 TM6SF1Q9BZW5 370 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 NEDD4P46934 1319 aa22.05■■□□□ 1.12
MCF2L-230ENST00000491028 SSC5DA1L4H1 1573 aa22.04■■□□□ 1.12
MCF2L-230ENST00000491028 HMGB1P09429 215 aaKnown RBP22.04■■□□□ 1.12
MCF2L-230ENST00000491028 NBPF12Q5TAG4 269 aaPredicted RBP22.04■■□□□ 1.12
MCF2L-230ENST00000491028 MAP1SQ66K74 1059 aaPredicted RBP22.04■■□□□ 1.12
MCF2L-230ENST00000491028 CHADLQ6NUI6 762 aa22.04■■□□□ 1.12
MCF2L-230ENST00000491028 USP48Q86UV5 1035 aa22.04■■□□□ 1.12
MCF2L-230ENST00000491028 NEK1Q96PY6 1258 aa22.04■■□□□ 1.12
MCF2L-230ENST00000491028 GLIS2Q9BZE0 524 aaPredicted RBP22.04■■□□□ 1.12
MCF2L-230ENST00000491028 DNAJC18Q9H819 358 aa22.04■■□□□ 1.12
MCF2L-230ENST00000491028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.04■■□□□ 1.123e-6■■□□□ 12.6
MCF2L-230ENST00000491028 MKNK2Q9HBH9 465 aa22.04■■□□□ 1.12
MCF2L-230ENST00000491028 TACC3Q9Y6A5 838 aa22.04■■□□□ 1.12
MCF2L-230ENST00000491028 NF2P35240 595 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 ADCK5Q3MIX3 580 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 TATDN1Q6P1N9 297 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 STK11IPQ8N1F8 1099 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 SLC44A5Q8NCS7 719 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 ESR2Q92731 530 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 CDCA5Q96FF9 252 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 JAKMIP1Q96N16 626 aaKnown RBP22.03■■□□□ 1.12
MCF2L-230ENST00000491028 TOMM22Q9NS69 142 aa22.03■■□□□ 1.12
MCF2L-230ENST00000491028 KIF3CO14782 793 aa22.02■■□□□ 1.12
MCF2L-230ENST00000491028 SHMT1P34896 483 aa22.02■■□□□ 1.12
MCF2L-230ENST00000491028 KIF2CQ99661 725 aa22.02■■□□□ 1.12
MCF2L-230ENST00000491028 FAM196BA6NMK8 535 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 PRDM1O75626 825 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 RASA1P20936 1047 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 RRP12Q5JTH9 1297 aaKnown RBP22.01■■□□□ 1.11
MCF2L-230ENST00000491028 PRAMEF18Q5VWM3 479 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 BLOC1S2Q6QNY1 142 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 MB21D2Q8IYB1 491 aaPredicted RBP22.01■■□□□ 1.11
MCF2L-230ENST00000491028 ZNF444Q8N0Y2 327 aaPredicted RBP22.01■■□□□ 1.11
MCF2L-230ENST00000491028 IL27Q8NEV9 243 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 CCDC17Q96LX7 622 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 ZNF341Q9BYN7 854 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 INCENPQ9NQS7 918 aa22.01■■□□□ 1.11
MCF2L-230ENST00000491028 GREB1LQ9C091 1923 aaPredicted RBP22.01■■□□□ 1.11
MCF2L-230ENST00000491028 B4E1Z4 1266 aa22■■□□□ 1.11
MCF2L-230ENST00000491028 CASTP20810 708 aaKnown RBP22■■□□□ 1.11
MCF2L-230ENST00000491028 ZSWIM6Q9HCJ5 1215 aa22■■□□□ 1.11
MCF2L-230ENST00000491028 WDR19Q8NEZ3 1342 aa22■■□□□ 1.11
MCF2L-230ENST00000491028 PLIN4Q96Q06 1357 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 PAPPA2Q9BXP8 1791 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 ATAD5Q96QE3 1844 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 TSPY2A6NKD2 308 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 RANBP6O60518 1105 aaKnown RBP21.99■■□□□ 1.11
MCF2L-230ENST00000491028 KDM4AO75164 1064 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 RABEP1Q15276 862 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms