RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 MYH6P13533 1939 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 POLR2AP24928 1970 aaKnown RBP16.7■□□□□ 0.26
VPS26A-205ENST00000489656 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 ENTPD3O75355 529 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-205ENST00000489656 PDE4BQ07343 736 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 ESR2Q92731 530 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
VPS26A-205ENST00000489656 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 MYH4Q9Y623 1939 aa16.7■□□□□ 0.26
VPS26A-205ENST00000489656 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 KDM4AO75164 1064 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 GMPSP49915 693 aaPredicted RBP16.69■□□□□ 0.26
VPS26A-205ENST00000489656 PLCD1P51178 756 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 NFIAQ12857 509 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 TTC6Q86TZ1 520 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 GPC2Q8N158 579 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 NKX2-3Q8TAU0 364 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 FAM198AQ9UFP1 575 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 SAP30BPQ9UHR5 308 aaKnown RBP16.69■□□□□ 0.26
VPS26A-205ENST00000489656 TPCN1Q9ULQ1 816 aa16.69■□□□□ 0.26
VPS26A-205ENST00000489656 SCN4AP35499 1836 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
VPS26A-205ENST00000489656 FGD1P98174 961 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 EVX2Q03828 476 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 PICALMQ13492 652 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
VPS26A-205ENST00000489656 BRF1Q92994 677 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 EHD4Q9H223 541 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 DHX36Q9H2U1 1008 aaKnown RBP16.68■□□□□ 0.26
VPS26A-205ENST00000489656 TDRD3Q9H7E2 651 aaKnown RBP16.68■□□□□ 0.26
VPS26A-205ENST00000489656 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 TMOD2Q9NZR1 351 aa16.68■□□□□ 0.26
VPS26A-205ENST00000489656 ANGEL1Q9UNK9 670 aaKnown RBP16.68■□□□□ 0.26
VPS26A-205ENST00000489656 ZC3H4Q9UPT8 1303 aaKnown RBP16.68■□□□□ 0.26
VPS26A-205ENST00000489656 LARGE1O95461 756 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 LIFRP42702 1097 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 GABPAQ06546 454 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 ME3Q16798 604 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 CHST3Q7LGC8 479 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 SGMS1Q86VZ5 419 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 IGDCC4Q8TDY8 1250 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
VPS26A-205ENST00000489656 ZNF70Q9UC06 446 aaPredicted RBP16.67■□□□□ 0.26
VPS26A-205ENST00000489656 GJA3Q9Y6H8 435 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 ATAD5Q96QE3 1844 aa16.67■□□□□ 0.26
VPS26A-205ENST00000489656 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
VPS26A-205ENST00000489656 HLA-DOAP06340 250 aa16.66■□□□□ 0.26
VPS26A-205ENST00000489656 HSP90AA1P07900 732 aaKnown RBP16.66■□□□□ 0.26
VPS26A-205ENST00000489656 DDIT3P35638 169 aa16.66■□□□□ 0.26
VPS26A-205ENST00000489656 SART3Q15020 963 aaKnown RBP16.66■□□□□ 0.26
VPS26A-205ENST00000489656 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
VPS26A-205ENST00000489656 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
VPS26A-205ENST00000489656 RNF181Q9P0P0 153 aa16.66■□□□□ 0.26
VPS26A-205ENST00000489656 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
VPS26A-205ENST00000489656 CNOT7Q9UIV1 285 aaKnown RBP16.66■□□□□ 0.26
VPS26A-205ENST00000489656 WNT10BO00744 389 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 MYO1BO43795 1136 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 PFKFB2O60825 505 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 CDK8P49336 464 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 APOBRQ0VD83 1088 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 METTL16Q86W50 562 aaKnown RBP16.65■□□□□ 0.26
VPS26A-205ENST00000489656 MICALL2Q8IY33 904 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 TMTC2Q8N394 836 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 GTF3C6Q969F1 213 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 LY9Q9HBG7 655 aa16.65■□□□□ 0.26
VPS26A-205ENST00000489656 CWC22Q9HCG8 908 aaKnown RBP16.65■□□□□ 0.26
VPS26A-205ENST00000489656 NID2Q14112 1375 aa16.64■□□□□ 0.26
VPS26A-205ENST00000489656 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.26
VPS26A-205ENST00000489656 SHTN1A0MZ66 631 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
VPS26A-205ENST00000489656 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
VPS26A-205ENST00000489656 PRDM1O75626 825 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 RASA1P20936 1047 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 CACNB3P54284 484 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 ST3GAL1Q11201 340 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 SEC23AQ15436 765 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 GPR162Q16538 588 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 CCDC178Q5BJE1 867 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 C9orf131Q5VYM1 1079 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
VPS26A-205ENST00000489656 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-205ENST00000489656 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms