RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 DTWD1Q8N5C7 304 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 PRM3Q9NNZ6 103 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 DNAJB12Q9NXW2 375 aaKnown RBP9.88□□□□□ -0.83
SMC6-209ENST00000489535 USP35Q9P2H5 1018 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 DISP2A7MBM2 1401 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 GLI3P10071 1580 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 KIF16BQ96L93 1317 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 BRWD3Q6RI45 1802 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 CYP27B1O15528 508 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 CD97P48960 835 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 HIRAP54198 1017 aaPredicted RBP9.87□□□□□ -0.83
SMC6-209ENST00000489535 PDE3AQ14432 1141 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 MSL1Q68DK7 614 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 B4GALNT3Q6L9W6 998 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 POTEAQ6S8J7 498 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 ZCRB1Q8TBF4 217 aaKnown RBP9.87□□□□□ -0.83
SMC6-209ENST00000489535 SUSD3Q96L08 255 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 TNNQ9UQP3 1299 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 ARFGEF2Q9Y6D5 1785 aa9.87□□□□□ -0.83
SMC6-209ENST00000489535 TCERG1O14776 1098 aaKnown RBP9.86□□□□□ -0.83
SMC6-209ENST00000489535 RGS9O75916 674 aaPredicted RBP9.86□□□□□ -0.83
SMC6-209ENST00000489535 HSP90AB1P08238 724 aaKnown RBP9.86□□□□□ -0.83
SMC6-209ENST00000489535 IRAK1P51617 712 aa9.86□□□□□ -0.83
SMC6-209ENST00000489535 SEMA3FQ13275 785 aa9.86□□□□□ -0.83
SMC6-209ENST00000489535 PANK1Q8TE04 598 aa9.86□□□□□ -0.83
SMC6-209ENST00000489535 NOB1Q9ULX3 412 aaKnown RBP9.86□□□□□ -0.83
SMC6-209ENST00000489535 SPATA31A6Q5VVP1 1343 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 FSTP19883 344 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 BRPF1P55201 1214 aaPredicted RBP9.85□□□□□ -0.83
SMC6-209ENST00000489535 GRIK5Q16478 980 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 SLC51AQ86UW1 340 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 CLUAP1Q96AJ1 413 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 CCDC136Q96JN2 1154 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 PHACTR1Q9C0D0 580 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 EFCC1Q9HA90 598 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 HCN4Q9Y3Q4 1203 aa9.85□□□□□ -0.83
SMC6-209ENST00000489535 SOS1Q07889 1333 aaPredicted RBP9.84□□□□□ -0.83
SMC6-209ENST00000489535 THSD7AQ9UPZ6 1657 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 TNS2Q63HR2 1409 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 IPO8O15397 1037 aaKnown RBP9.84□□□□□ -0.83
SMC6-209ENST00000489535 KCNQ3O43525 872 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 HSPA1LP34931 641 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 PSMA6P60900 246 aaKnown RBP9.84□□□□□ -0.83
SMC6-209ENST00000489535 ATF7IPQ6VMQ6 1270 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 FTSJ3Q8IY81 847 aaKnown RBP9.84□□□□□ -0.83
SMC6-209ENST00000489535 DZIP1LQ8IYY4 767 aaKnown RBP9.84□□□□□ -0.83
SMC6-209ENST00000489535 SLC52A2Q9HAB3 445 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 COG6Q9Y2V7 657 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 TJP1Q07157 1748 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 NUP188Q5SRE5 1749 aa9.84□□□□□ -0.83
SMC6-209ENST00000489535 SPATA31A1Q5TZJ5 1347 aa9.83□□□□□ -0.84
SMC6-209ENST00000489535 RLBP1P12271 317 aa9.83□□□□□ -0.84
SMC6-209ENST00000489535 TRIM27P14373 513 aa9.83□□□□□ -0.84
SMC6-209ENST00000489535 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
SMC6-209ENST00000489535 IGF2-ASQ6U949 168 aa9.83□□□□□ -0.84
SMC6-209ENST00000489535 DDX54Q8TDD1 881 aaKnown RBP9.83□□□□□ -0.84
SMC6-209ENST00000489535 C8orf37Q96NL8 207 aa9.83□□□□□ -0.84
SMC6-209ENST00000489535 BTAF1O14981 1849 aa9.83□□□□□ -0.84
SMC6-209ENST00000489535 ANKRD36CQ5JPF3 1778 aa9.83□□□□□ -0.84
SMC6-209ENST00000489535 TAL1P17542 331 aaPredicted RBP9.82□□□□□ -0.84
SMC6-209ENST00000489535 SOX11P35716 441 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 MVPQ14764 893 aaKnown RBP9.82□□□□□ -0.84
SMC6-209ENST00000489535 WASHC4Q2M389 1173 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 CCDC30Q5VVM6 783 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 NGLY1Q96IV0 654 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 STK31Q9BXU1 1019 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 GSX2Q9BZM3 304 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 THRAP3Q9Y2W1 955 aaKnown RBP9.82□□□□□ -0.84
SMC6-209ENST00000489535 CCDC9Q9Y3X0 531 aaKnown RBP9.82□□□□□ -0.84
SMC6-209ENST00000489535 OAS3Q9Y6K5 1087 aaKnown RBP9.82□□□□□ -0.84
SMC6-209ENST00000489535 BCL9LQ86UU0 1499 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 KCPQ6ZWJ8 1503 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 SPATA31A5Q5VU36 1347 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 SPATA31A7Q8IWB4 1347 aa9.82□□□□□ -0.84
SMC6-209ENST00000489535 NHSQ6T4R5 1651 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 EXOC5O00471 708 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 LZTS3O60299 673 aaPredicted RBP9.81□□□□□ -0.84
SMC6-209ENST00000489535 HOXB7P09629 217 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 CABP4P57796 275 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 SLC39A6Q13433 755 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 HDGFL1Q5TGJ6 251 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 MEX3CQ5U5Q3 659 aaKnown RBP9.81□□□□□ -0.84
SMC6-209ENST00000489535 BTLAQ7Z6A9 289 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 UNC5CLQ8IV45 518 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 ARHGAP45Q92619 1136 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 LPIN3Q9BQK8 851 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 API5Q9BZZ5 524 aaKnown RBP9.81□□□□□ -0.84
SMC6-209ENST00000489535 TSPAN10Q9H1Z9 355 aaPredicted RBP9.81□□□□□ -0.84
SMC6-209ENST00000489535 NUP98P52948 1817 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 TAF1LQ8IZX4 1826 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 COL5A3P25940 1745 aaPredicted RBP9.81□□□□□ -0.84
SMC6-209ENST00000489535 RGS12O14924 1447 aa9.81□□□□□ -0.84
SMC6-209ENST00000489535 HEG1Q9ULI3 1381 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 ERVV-2B6SEH9 535 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 MED26O95402 600 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 NCOA4Q13772 614 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 ZNF790Q6PG37 636 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms