RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 TACC3Q9Y6A5 838 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 CHD4Q14839 1912 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 GNPATO15228 680 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 HIBADHP31937 336 aaKnown RBP10.23□□□□□ -0.77
CSMD2-209ENST00000489419 BICDL1Q6ZP65 573 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 MIGA1Q8NAN2 632 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 TIGD1Q96MW7 591 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
CSMD2-209ENST00000489419 BTAF1O14981 1849 aa10.23□□□□□ -0.77
CSMD2-209ENST00000489419 FAM237AA0A1B0GTK4 181 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 KIF28PB7ZC32 967 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 AP5Z1O43299 807 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 ONECUT3O60422 494 aaPredicted RBP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 PPFIA3O75145 1194 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 RTN1Q16799 776 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 LUZP1Q86V48 1076 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 RAB11FIP4Q86YS3 637 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 UBAC1Q9BSL1 405 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 YY1AP1Q9H869 796 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 PRDM16Q9HAZ2 1276 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 INCENPQ9NQS7 918 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 COL4A1P02462 1669 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 RANBP6O60518 1105 aaKnown RBP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 DEXIO95424 95 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 TM4SF1P30408 202 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 IQCB1Q15051 598 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 SAFBQ15424 915 aaKnown RBP eCLIP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 SPTY2D1Q68D10 685 aaPredicted RBP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 SARM1Q6SZW1 724 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 ADGRA1Q86SQ6 560 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 FANCBQ8NB91 859 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 SDF4Q9BRK5 362 aa10.22□□□□□ -0.77
CSMD2-209ENST00000489419 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 NAT10Q9H0A0 1025 aaKnown RBP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 SRP68Q9UHB9 627 aaKnown RBP10.22□□□□□ -0.77
CSMD2-209ENST00000489419 CACNA1SQ13698 1873 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 COL1A1P02452 1464 aaPredicted RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 CDC25BP30305 580 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 RBM6P78332 1123 aaKnown RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 SEC23AQ15436 765 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 RRP12Q5JTH9 1297 aaKnown RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 TRAPPC3LQ5T215 181 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 PLA2G4DQ86XP0 818 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 EGFL6Q8IUX8 553 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 PIBF1Q8WXW3 757 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 PHKBQ93100 1093 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 NSUN4Q96CB9 384 aaKnown RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 DNAJC25Q9H1X3 360 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 FOXP1Q9H334 677 aaPredicted RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 ATP8A2Q9NTI2 1148 aa10.21□□□□□ -0.77
CSMD2-209ENST00000489419 IQSEC3Q9UPP2 1182 aaPredicted RBP10.21□□□□□ -0.77
CSMD2-209ENST00000489419 GOLGA6L19H0YKK7 550 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 CALM1P0DP23 149 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 CALM2P0DP24 149 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 CALM3P0DP25 149 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.78
CSMD2-209ENST00000489419 KCNQ4P56696 695 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 PLCB2Q00722 1185 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 PTF1AQ7RTS3 328 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 ELOA2Q8IYF1 753 aaPredicted RBP10.21□□□□□ -0.78
CSMD2-209ENST00000489419 ZNF654Q8IZM8 581 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 BPIFA3Q9BQP9 254 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 SLC26A6Q9BXS9 759 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 KIAA1468Q9P260 1216 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 LEMD3Q9Y2U8 911 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 MORC2Q9Y6X9 1032 aaPredicted RBP10.21□□□□□ -0.78
CSMD2-209ENST00000489419 LY75O60449 1722 aa10.21□□□□□ -0.78
CSMD2-209ENST00000489419 CASZ1Q86V15 1759 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 MINDY4BA8MYZ0 360 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 ORC4O43929 436 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 RXRAP19793 462 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 RFC4P35249 363 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 ZNF75DP51815 510 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 NDUFA8P51970 172 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 PTPAQ15257 358 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 SBK1Q52WX2 424 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
CSMD2-209ENST00000489419 NBPF11Q86T75 865 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 CEP57L1Q8IYX8 460 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 SDR42E1Q8WUS8 393 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 GJD4Q96KN9 370 aaPredicted RBP10.2□□□□□ -0.78
CSMD2-209ENST00000489419 AIFM3Q96NN9 605 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 MAP3K14Q99558 947 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 RNF26Q9BY78 433 aaPredicted RBP10.2□□□□□ -0.78
CSMD2-209ENST00000489419 CRNKL1Q9BZJ0 848 aaKnown RBP10.2□□□□□ -0.78
CSMD2-209ENST00000489419 GJB4Q9NTQ9 266 aa10.2□□□□□ -0.78
CSMD2-209ENST00000489419 GEMIN8Q9NWZ8 242 aaKnown RBP10.2□□□□□ -0.78
CSMD2-209ENST00000489419 A0A1B0GVL5 298 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 CUTAO60888 179 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 ZNF202O95125 648 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 MMP1P03956 469 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 SLC3A2P08195 630 aaKnown RBP10.19□□□□□ -0.78
CSMD2-209ENST00000489419 IQCA1Q86XH1 822 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 NOSTRINQ8IVI9 506 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 ZSCAN10Q96SZ4 725 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms