RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
USP11-211ENST00000489111 DYNLL2Q96FJ2 89 aa11.77□□□□□ -0.53
USP11-211ENST00000489111 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
USP11-211ENST00000489111 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
USP11-211ENST00000489111 DDX4Q9NQI0 724 aaKnown RBP11.77□□□□□ -0.53
USP11-211ENST00000489111 GPHNQ9NQX3 736 aaPredicted RBP11.77□□□□□ -0.53
USP11-211ENST00000489111 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.53
USP11-211ENST00000489111 PCDHAC2Q9Y5I4 1007 aa11.77□□□□□ -0.53
USP11-211ENST00000489111 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
USP11-211ENST00000489111 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 PFKFB2O60825 505 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
USP11-211ENST00000489111 GMPSP49915 693 aaPredicted RBP11.76□□□□□ -0.53
USP11-211ENST00000489111 PLCD1P51178 756 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 CACNB3P54284 484 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 EVX2Q03828 476 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 NFIAQ12857 509 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 WTAPQ15007 396 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 SYNE3Q6ZMZ3 975 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 C16orf86Q6ZW13 317 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 ZSCAN29Q8IWY8 852 aaPredicted RBP11.76□□□□□ -0.53
USP11-211ENST00000489111 ZSCAN10Q96SZ4 725 aaPredicted RBP11.76□□□□□ -0.53
USP11-211ENST00000489111 IDI2Q9BXS1 227 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
USP11-211ENST00000489111 TDRD3Q9H7E2 651 aaKnown RBP11.76□□□□□ -0.53
USP11-211ENST00000489111 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 SCN9AQ15858 1988 aa11.76□□□□□ -0.53
USP11-211ENST00000489111 FER1L6Q2WGJ9 1857 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 DHX16O60231 1041 aaKnown RBP11.75□□□□□ -0.53
USP11-211ENST00000489111 ENTPD3O75355 529 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
USP11-211ENST00000489111 DDIT3P35638 169 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 LIFRP42702 1097 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 PRELPP51888 382 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 EVCP57679 992 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 TCP10Q12799 353 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 CCDC178Q5BJE1 867 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 ZNF444Q8N0Y2 327 aaPredicted RBP11.75□□□□□ -0.53
USP11-211ENST00000489111 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
USP11-211ENST00000489111 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 IGDCC4Q8TDY8 1250 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
USP11-211ENST00000489111 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 MYOZ2Q9NPC6 264 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 SERPINB13Q9UIV8 391 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 SLC12A7Q9Y666 1083 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 TNKSO95271 1327 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
USP11-211ENST00000489111 CHD4Q14839 1912 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 CLRN2A0PK11 232 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 CPLX1O14810 134 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 ZBTB43O43298 467 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 YBX3P16989 372 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP11-211ENST00000489111 CDK8P49336 464 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 METAP2P50579 478 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP11-211ENST00000489111 ZNF280AP59817 542 aaPredicted RBP11.74□□□□□ -0.53
USP11-211ENST00000489111 NUCB2P80303 420 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 FAM47AQ5JRC9 791 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
USP11-211ENST00000489111 APOA5Q6Q788 366 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 SLC44A5Q8NCS7 719 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 NKX2-3Q8TAU0 364 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 DPF2Q92785 391 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 LLPHQ9BRT6 129 aaKnown RBP11.74□□□□□ -0.53
USP11-211ENST00000489111 EHD4Q9H223 541 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 VEZTQ9HBM0 779 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 RNF181Q9P0P0 153 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
USP11-211ENST00000489111 FAM198AQ9UFP1 575 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 MYH2Q9UKX2 1941 aa11.74□□□□□ -0.53
USP11-211ENST00000489111 TCP10L2B9ZVM9 353 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 ZNF646O15015 1829 aaPredicted RBP11.73□□□□□ -0.53
USP11-211ENST00000489111 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
USP11-211ENST00000489111 LAMB1P07942 1786 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 RASA1P20936 1047 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 GJB2P29033 226 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 CCT2P78371 535 aaKnown RBP11.73□□□□□ -0.53
USP11-211ENST00000489111 TFAP4Q01664 338 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 ST3GAL1Q11201 340 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 SCRN1Q12765 414 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 GPR162Q16538 588 aa11.73□□□□□ -0.53
USP11-211ENST00000489111 DDX60LQ5H9U9 1706 aaKnown RBP11.73□□□□□ -0.53
USP11-211ENST00000489111 CPLX2Q6PUV4 134 aaKnown RBP11.73□□□□□ -0.53
USP11-211ENST00000489111 ENAHQ8N8S7 591 aaPredicted RBP11.73□□□□□ -0.53
USP11-211ENST00000489111 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms