RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ME3Q16798 604 aa15.01□□□□□ -0.01
NELFE-209ENST00000488426 PRKAB2O43741 272 aa15□□□□□ -0.01
NELFE-209ENST00000488426 MCM5P33992 734 aa15□□□□□ -0.01
NELFE-209ENST00000488426 FGD1P98174 961 aa15□□□□□ -0.01
NELFE-209ENST00000488426 NBR1Q14596 966 aa15□□□□□ -0.01
NELFE-209ENST00000488426 MB21D2Q8IYB1 491 aaPredicted RBP15□□□□□ -0.01
NELFE-209ENST00000488426 LARP6Q9BRS8 491 aaKnown RBP15□□□□□ -0.01
NELFE-209ENST00000488426 NBPF3Q9H094 633 aa15□□□□□ -0.01
NELFE-209ENST00000488426 LDHCP07864 332 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 DEKP35659 375 aaKnown RBP14.99□□□□□ -0.01
NELFE-209ENST00000488426 GRIK5Q16478 980 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 CERS3Q8IU89 383 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 TBC1D10CQ8IV04 446 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 CRNKL1Q9BZJ0 848 aaKnown RBP14.99□□□□□ -0.01
NELFE-209ENST00000488426 WBP1LQ9NX94 342 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 MYH2Q9UKX2 1941 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 DYNLL1P63167 89 aaKnown RBP14.99□□□□□ -0.01
NELFE-209ENST00000488426 MOB2Q70IA6 237 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 CDCA5Q96FF9 252 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
NELFE-209ENST00000488426 CNNM2Q9H8M5 875 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 ANAPC4Q9UJX5 808 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 SUGT1Q9Y2Z0 365 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 LAMB1P07942 1786 aa14.99□□□□□ -0.01
NELFE-209ENST00000488426 CCDC83Q8IWF9 413 aa14.98□□□□□ -0.01
NELFE-209ENST00000488426 OGFOD1Q8N543 542 aa14.98□□□□□ -0.01
NELFE-209ENST00000488426 TNPO1Q92973 898 aaKnown RBP14.98□□□□□ -0.01
NELFE-209ENST00000488426 BRF1Q92994 677 aa14.98□□□□□ -0.01
NELFE-209ENST00000488426 SMC3Q9UQE7 1217 aa14.98□□□□□ -0.01
NELFE-209ENST00000488426 PRC1O43663 620 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 HUNKP57058 714 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 MFSD14BQ5SR56 506 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 AKNAD1Q5T1N1 836 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 SLF2Q8IX21 1173 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 SDR42E1Q8WUS8 393 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 STAG1Q8WVM7 1258 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 CHMP4CQ96CF2 233 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
NELFE-209ENST00000488426 RNF41Q9H4P4 317 aaPredicted RBP14.97□□□□□ -0.01
NELFE-209ENST00000488426 GBA2Q9HCG7 927 aaPredicted RBP14.97□□□□□ -0.01
NELFE-209ENST00000488426 ATP8A2Q9NTI2 1148 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 AATFQ9NY61 560 aaKnown RBP eCLIP14.97□□□□□ -0.01
NELFE-209ENST00000488426 MROH7-TTC4A0A0A0MT08 1334 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 MYO3BQ8WXR4 1341 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
NELFE-209ENST00000488426 BAG3O95817 575 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 EVCP57679 992 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 PPP4CP60510 307 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 ST3GAL1Q11201 340 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 CLEC17AQ6ZS10 378 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 GBP4Q96PP9 640 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 KRT23Q9C075 422 aa14.97□□□□□ -0.01
NELFE-209ENST00000488426 PPARAQ07869 468 aa14.96□□□□□ -0.01
NELFE-209ENST00000488426 GTF3C6Q969F1 213 aa14.96□□□□□ -0.01
NELFE-209ENST00000488426 ZNF274Q96GC6 653 aaPredicted RBP14.96□□□□□ -0.01
NELFE-209ENST00000488426 FAM163AQ96GL9 167 aaPredicted RBP14.96□□□□□ -0.01
NELFE-209ENST00000488426 PRMT6Q96LA8 375 aaPredicted RBP14.96□□□□□ -0.01
NELFE-209ENST00000488426 LRRC2Q9BYS8 371 aa14.96□□□□□ -0.01
NELFE-209ENST00000488426 FZD1Q9UP38 647 aa14.96□□□□□ -0.01
NELFE-209ENST00000488426 PFKFB2O60825 505 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 PCP11498 1178 aaKnown RBP14.95□□□□□ -0.02
NELFE-209ENST00000488426 PDIA4P13667 645 aaKnown RBP14.95□□□□□ -0.02
NELFE-209ENST00000488426 ANTXR2P58335 489 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 MFSD6Q6ZSS7 791 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 NECAB1Q8N987 351 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 TSKSQ9UJT2 592 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 NEDD4P46934 1319 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 FAM155AB1AL88 458 aaPredicted RBP14.95□□□□□ -0.02
NELFE-209ENST00000488426 BRD1O95696 1058 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 MCM4P33991 863 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 CTDSPL2Q05D32 466 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 IFFO2Q5TF58 517 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 TMEM87BQ96K49 555 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 GAKO14976 1311 aa14.95□□□□□ -0.02
NELFE-209ENST00000488426 NAV1Q8NEY1 1877 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 B4E1Z4 1266 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 PLCG2P16885 1265 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 ECE1P42892 770 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 APOBRQ0VD83 1088 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 PKP1Q13835 747 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 DIXDC1Q155Q3 683 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 CFAP100Q494V2 611 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 CHST3Q7LGC8 479 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 C2orf69Q8N8R5 385 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 LLPHQ9BRT6 129 aaKnown RBP14.94□□□□□ -0.02
NELFE-209ENST00000488426 DCP1AQ9NPI6 582 aaPredicted RBP14.94□□□□□ -0.02
NELFE-209ENST00000488426 ARPP21Q9UBL0 812 aaPredicted RBP14.94□□□□□ -0.02
NELFE-209ENST00000488426 PITPNM2Q9BZ72 1349 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 CDK5RAP2Q96SN8 1893 aa14.94□□□□□ -0.02
NELFE-209ENST00000488426 GPR75-ASB3A0A0A6YYF3 556 aa14.93□□□□□ -0.02
NELFE-209ENST00000488426 CLRN2A0PK11 232 aa14.93□□□□□ -0.02
NELFE-209ENST00000488426 GJB2P29033 226 aa14.93□□□□□ -0.02
NELFE-209ENST00000488426 LBX1P52954 281 aa14.93□□□□□ -0.02
NELFE-209ENST00000488426 FKBP1AP62942 108 aaKnown RBP14.93□□□□□ -0.02
NELFE-209ENST00000488426 HHIPL1Q96JK4 782 aa14.93□□□□□ -0.02
NELFE-209ENST00000488426 ANGEL1Q9UNK9 670 aaKnown RBP14.93□□□□□ -0.02
NELFE-209ENST00000488426 ZDHHC9Q9Y397 364 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms