RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ZNF862O60290 1169 aa5.07□□□□□ -1.6
R3HDM1-219ENST00000488035 GSTP1P09211 210 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-219ENST00000488035 TMEM253P0C7T8 217 aa5.07□□□□□ -1.6
R3HDM1-219ENST00000488035 CLCN7P51798 805 aa5.07□□□□□ -1.6
R3HDM1-219ENST00000488035 FYB2Q5VWT5 728 aa5.07□□□□□ -1.6
R3HDM1-219ENST00000488035 ZC3H12CQ9C0D7 883 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-219ENST00000488035 ANKRD33BA6NCL7 494 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 GNAT3A8MTJ3 354 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 CTSWP56202 376 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 CIAPIN1Q6FI81 312 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 NPAS4Q8IUM7 802 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 SPACA3Q8IXA5 215 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 ZNF428Q96B54 188 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 CCDC120Q96HB5 630 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 HEXIM2Q96MH2 286 aaKnown RBP5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 ASB16Q96NS5 453 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 FAM129BQ96TA1 746 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 RBCK1Q9BYM8 510 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 BRPF3Q9ULD4 1205 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 PCDHGC5Q9Y5F6 944 aa5.06□□□□□ -1.6
R3HDM1-219ENST00000488035 NPIPB6E9PJ23 425 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 NDUFB5O43674 189 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 INHBBP09529 407 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 GDNFP39905 211 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 TAGLNQ01995 201 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 PPP2R3AQ06190 1150 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 PRPF40BQ6NWY9 871 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 RNF214Q8ND24 703 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 ISL2Q96A47 359 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 TRAK1Q9UPV9 953 aa5.05□□□□□ -1.6
R3HDM1-219ENST00000488035 TCAF2A6NFQ2 919 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 NEFMP07197 916 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 ERVK-24P63145 666 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 KCNA10Q16322 511 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 FAM214BQ7L5A3 538 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 C20orf173Q96LM9 149 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 CSRNP1Q96S65 589 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 NSUN3Q9H649 340 aaKnown RBP5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 CD320Q9NPF0 282 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 PRDM10Q9NQV6 1147 aa5.04□□□□□ -1.6
R3HDM1-219ENST00000488035 PITPNM2Q9BZ72 1349 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 TMEM238LA0A1B0GVL6 79 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 TREHO43280 583 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 CPNE3O75131 537 aaKnown RBP5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 P4HBP07237 508 aaKnown RBP5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 MED14OSP0DP75 135 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 ORC1Q13415 861 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 DSC3Q14574 896 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 NKPD1Q17RQ9 610 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 ZC3H12AQ5D1E8 599 aaKnown RBP5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 DBX2Q6ZNG2 339 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 TMC1Q8TDI8 760 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 KCNB2Q92953 911 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 DIRC2Q96SL1 478 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 SETDB2Q96T68 719 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 NIF3L1Q9GZT8 377 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 ABCB6Q9NP58 842 aa5.03□□□□□ -1.6
R3HDM1-219ENST00000488035 HOXA5P20719 270 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 ZNF157P51786 506 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 USPL1Q5W0Q7 1092 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 ATG14Q6ZNE5 492 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 FBXO33Q7Z6M2 555 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 FOXQ1Q9C009 403 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 EPB41L4BQ9H329 900 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 CARS2Q9HA77 564 aaKnown RBP5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 KCNK12Q9HB15 430 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 NPHS2Q9NP85 383 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 DCP1AQ9NPI6 582 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 TMEM39AQ9NV64 488 aa5.02□□□□□ -1.61
R3HDM1-219ENST00000488035 GADD45BO75293 160 aaPredicted RBP5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 RAC2P15153 192 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 GLDCP23378 1020 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 FMR1Q06787 632 aaKnown RBP eCLIP5.01□□□□□ -1.611e-6■■■■■ 39.4
R3HDM1-219ENST00000488035 FAAP100Q0VG06 881 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 PDE3BQ13370 1112 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 CITED4Q96RK1 184 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 PRDM5Q9NQX1 630 aaPredicted RBP5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 RNF19AQ9NV58 838 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 PPP4R2Q9NY27 417 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 MAPK8IP1Q9UQF2 711 aa5.01□□□□□ -1.61
R3HDM1-219ENST00000488035 FAM155AB1AL88 458 aaPredicted RBP5□□□□□ -1.61
R3HDM1-219ENST00000488035 NUAK1O60285 661 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 PDZD3Q86UT5 571 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 ZSCAN29Q8IWY8 852 aaPredicted RBP5□□□□□ -1.61
R3HDM1-219ENST00000488035 RELTQ969Z4 430 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 ALKBH8Q96BT7 664 aaKnown RBP5□□□□□ -1.61
R3HDM1-219ENST00000488035 DMRTB1Q96MA1 342 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 SLC26A8Q96RN1 970 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 EMILIN2Q9BXX0 1053 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 DNAJC25Q9H1X3 360 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 GPN3Q9UHW5 284 aaPredicted RBP5□□□□□ -1.61
R3HDM1-219ENST00000488035 WWC3Q9ULE0 1092 aa5□□□□□ -1.61
R3HDM1-219ENST00000488035 UNCXA6NJT0 531 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 ARNTP27540 789 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 MAPK8P45983 427 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 DTHD1Q6ZMT9 781 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 CDC37L1Q7L3B6 337 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 KCT2Q8NC54 265 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 CCDC74AQ96AQ1 378 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 PICK1Q9NRD5 415 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms