RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 MAPK8P45983 427 aa7.29□□□□□ -1.24
UBR3-211ENST00000487689 TTLL4Q14679 1199 aa7.29□□□□□ -1.24
UBR3-211ENST00000487689 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
UBR3-211ENST00000487689 SYDE1Q6ZW31 735 aaPredicted RBP7.29□□□□□ -1.24
UBR3-211ENST00000487689 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBR3-211ENST00000487689 FBF1Q8TES7 1133 aa7.29□□□□□ -1.24
UBR3-211ENST00000487689 WDR89Q96FK6 387 aaPredicted RBP7.29□□□□□ -1.24
UBR3-211ENST00000487689 PLAGL2Q9UPG8 496 aa7.29□□□□□ -1.24
UBR3-211ENST00000487689 TMEM265A0A087WTH1 108 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 ZNF862O60290 1169 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 LEFTY1O75610 366 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 CEACAM5P06731 702 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 OXCT1P55809 520 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 ENOX2Q16206 610 aaKnown RBP7.28□□□□□ -1.24
UBR3-211ENST00000487689 ALG1LQ6GMV1 187 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 PI16Q6UXB8 463 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 MKNK2Q9HBH9 465 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 DISC1Q9NRI5 854 aa7.28□□□□□ -1.24
UBR3-211ENST00000487689 GIPC1O14908 333 aa7.27□□□□□ -1.25
UBR3-211ENST00000487689 TREHO43280 583 aa7.27□□□□□ -1.25
UBR3-211ENST00000487689 LRRC14Q15048 493 aa7.27□□□□□ -1.25
UBR3-211ENST00000487689 CDC37L1Q7L3B6 337 aa7.27□□□□□ -1.25
UBR3-211ENST00000487689 PPM1HQ9ULR3 514 aa7.27□□□□□ -1.25
UBR3-211ENST00000487689 SPG7Q9UQ90 795 aa7.27□□□□□ -1.25
UBR3-211ENST00000487689 ERVK-24P63145 666 aa7.26□□□□□ -1.25
UBR3-211ENST00000487689 RNF214Q8ND24 703 aa7.26□□□□□ -1.25
UBR3-211ENST00000487689 RAPGEFL1Q9UHV5 662 aa7.26□□□□□ -1.25
UBR3-211ENST00000487689 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
UBR3-211ENST00000487689 C1QTNF9P0C862 333 aa7.25□□□□□ -1.25
UBR3-211ENST00000487689 ITIH2P19823 946 aa7.25□□□□□ -1.25
UBR3-211ENST00000487689 FYB2Q5VWT5 728 aa7.25□□□□□ -1.25
UBR3-211ENST00000487689 TPTE2Q6XPS3 522 aa7.25□□□□□ -1.25
UBR3-211ENST00000487689 PRR23BQ6ZRT6 265 aa7.25□□□□□ -1.25
UBR3-211ENST00000487689 GTF2IRD1Q9UHL9 959 aa7.25□□□□□ -1.25
UBR3-211ENST00000487689 CTNND2Q9UQB3 1225 aa7.25□□□□□ -1.25
UBR3-211ENST00000487689 LMNB1P20700 586 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 DSC3Q14574 896 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
UBR3-211ENST00000487689 LLGL2Q6P1M3 1020 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 PDZD3Q86UT5 571 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 KCT2Q8NC54 265 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 GPBAR1Q8TDU6 330 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 ISL2Q96A47 359 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 DUSP23Q9BVJ7 150 aa7.24□□□□□ -1.25
UBR3-211ENST00000487689 ZP2Q05996 745 aa7.23□□□□□ -1.25
UBR3-211ENST00000487689 KCNA1Q09470 495 aa7.23□□□□□ -1.25
UBR3-211ENST00000487689 IKZF1Q13422 519 aa7.23□□□□□ -1.25
UBR3-211ENST00000487689 MPZL3Q6UWV2 235 aa7.23□□□□□ -1.25
UBR3-211ENST00000487689 TOP6BLQ8N6T0 577 aa7.23□□□□□ -1.25
UBR3-211ENST00000487689 ELMO3Q96BJ8 720 aa7.23□□□□□ -1.25
UBR3-211ENST00000487689 NECAB3Q96P71 396 aaPredicted RBP7.23□□□□□ -1.25
UBR3-211ENST00000487689 PCDHGC5Q9Y5F6 944 aa7.23□□□□□ -1.25
UBR3-211ENST00000487689 TRIM37O94972 964 aa7.22□□□□□ -1.25
UBR3-211ENST00000487689 KRT1P04264 644 aa7.22□□□□□ -1.25
UBR3-211ENST00000487689 AFMP43652 599 aa7.22□□□□□ -1.25
UBR3-211ENST00000487689 DIEXFQ68CQ4 756 aaKnown RBP7.22□□□□□ -1.25
UBR3-211ENST00000487689 TNKS2Q9H2K2 1166 aa7.22□□□□□ -1.25
UBR3-211ENST00000487689 SNX11Q9Y5W9 270 aa7.22□□□□□ -1.25
UBR3-211ENST00000487689 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
UBR3-211ENST00000487689 GNAT3A8MTJ3 354 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 NFIBO00712 420 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 GLI1P08151 1106 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 INHBBP09529 407 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 FGD1P98174 961 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 SCARA3Q6AZY7 606 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 FRMD6Q96NE9 622 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 ASB16Q96NS5 453 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 PCDHA4Q9UN74 947 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 CYP8B1Q9UNU6 501 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 CSADQ9Y600 493 aa7.21□□□□□ -1.26
UBR3-211ENST00000487689 DCDC2CA8MYV0 355 aa7.2□□□□□ -1.26
UBR3-211ENST00000487689 FANCGO15287 622 aa7.2□□□□□ -1.26
UBR3-211ENST00000487689 NEFMP07197 916 aa7.2□□□□□ -1.26
UBR3-211ENST00000487689 AMIGO3Q86WK7 504 aa7.2□□□□□ -1.26
UBR3-211ENST00000487689 STK35Q8TDR2 534 aa7.2□□□□□ -1.26
UBR3-211ENST00000487689 ASB11Q8WXH4 323 aa7.2□□□□□ -1.26
UBR3-211ENST00000487689 FAM8A1Q9UBU6 413 aa7.2□□□□□ -1.26
UBR3-211ENST00000487689 NPIPB6E9PJ23 425 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 FBXO24O75426 580 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 FMR1Q06787 632 aaKnown RBP eCLIP7.19□□□□□ -1.26
UBR3-211ENST00000487689 ZNF252P-AS1Q0IIN9 211 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 PPM1JQ5JR12 505 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 C3orf58Q8NDZ4 430 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 ZNF507Q8TCN5 953 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 KIRREL1Q96J84 757 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 PRDM10Q9NQV6 1147 aa7.19□□□□□ -1.26
UBR3-211ENST00000487689 TTF2Q9UNY4 1162 aaKnown RBP7.19□□□□□ -1.26
UBR3-211ENST00000487689 ENC1O14682 589 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 CTSWP56202 376 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 TMEM67Q5HYA8 995 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 KRTAP5-3Q6L8H2 238 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 HDXQ7Z353 690 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 C12orf40Q86WS4 652 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 FBXO15Q8NCQ5 510 aaPredicted RBP7.18□□□□□ -1.26
UBR3-211ENST00000487689 HEXIM2Q96MH2 286 aaKnown RBP7.18□□□□□ -1.26
UBR3-211ENST00000487689 C12orf49Q9H741 205 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 JAG2Q9Y219 1238 aa7.18□□□□□ -1.26
UBR3-211ENST00000487689 PCNX4Q63HM2 1172 aa7.17□□□□□ -1.26
UBR3-211ENST00000487689 GRIN3AQ8TCU5 1115 aa7.17□□□□□ -1.26
UBR3-211ENST00000487689 DIRC2Q96SL1 478 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms