RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 MKNK2Q9HBH9 465 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
ZNF541-204ENST00000487275 PCDHAC2Q9Y5I4 1007 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 ROBO3Q96MS0 1386 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 ARFGEF1Q9Y6D6 1849 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 NAV1Q8NEY1 1877 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
ZNF541-204ENST00000487275 ZNF646O15015 1829 aaPredicted RBP9.43□□□□□ -0.9
ZNF541-204ENST00000487275 PSME4Q14997 1843 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 LAMB1P07942 1786 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 SPDYE2BA6NHP3 402 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 CCDC69A6NI79 296 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 TSPY2A6NKD2 308 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 GOLGA8BA8MQT2 603 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 FZD9O00144 591 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 SPDYE6P0CI01 402 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 LMNB1P20700 586 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 DDIT3P35638 169 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 LIFRP42702 1097 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 MMP14P50281 582 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 PLCD1P51178 756 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 NUCB2P80303 420 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 EVX2Q03828 476 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 SYNE3Q6ZMZ3 975 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 ZNF444Q8N0Y2 327 aaPredicted RBP9.43□□□□□ -0.9
ZNF541-204ENST00000487275 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 GTF3C6Q969F1 213 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 IDI2Q9BXS1 227 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 TDRD3Q9H7E2 651 aaKnown RBP9.43□□□□□ -0.9
ZNF541-204ENST00000487275 DDX4Q9NQI0 724 aaKnown RBP9.43□□□□□ -0.9
ZNF541-204ENST00000487275 GJA3Q9Y6H8 435 aa9.43□□□□□ -0.9
ZNF541-204ENST00000487275 ADAMTSL1Q8N6G6 1762 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 TNKSO95271 1327 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 MYO1BO43795 1136 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
ZNF541-204ENST00000487275 GJB2P29033 226 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 PDIA3P30101 505 aaKnown RBP9.42□□□□□ -0.9
ZNF541-204ENST00000487275 CDK8P49336 464 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 PRELPP51888 382 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 CACNB3P54284 484 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 EVCP57679 992 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 CCT2P78371 535 aaKnown RBP9.42□□□□□ -0.9
ZNF541-204ENST00000487275 ST3GAL1Q11201 340 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 SCRN1Q12765 414 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 TCP10Q12799 353 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 NFIAQ12857 509 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 FAM47AQ5JRC9 791 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 TMTC2Q8N394 836 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 PRMT6Q96LA8 375 aaPredicted RBP9.42□□□□□ -0.9
ZNF541-204ENST00000487275 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
ZNF541-204ENST00000487275 DHX36Q9H2U1 1008 aaKnown RBP9.42□□□□□ -0.9
ZNF541-204ENST00000487275 LY9Q9HBG7 655 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 BRPF3Q9ULD4 1205 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 SLC12A7Q9Y666 1083 aa9.42□□□□□ -0.9
ZNF541-204ENST00000487275 CLRN2A0PK11 232 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 ZBTB43O43298 467 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 DHX16O60231 1041 aaKnown RBP9.41□□□□□ -0.9
ZNF541-204ENST00000487275 ENTPD3O75355 529 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 GMPSP49915 693 aaPredicted RBP9.41□□□□□ -0.9
ZNF541-204ENST00000487275 METAP2P50579 478 aaKnown RBP eCLIP9.41□□□□□ -0.9
ZNF541-204ENST00000487275 TFAP4Q01664 338 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 IFIT1BQ5T764 474 aaKnown RBP9.41□□□□□ -0.9
ZNF541-204ENST00000487275 ZSCAN29Q8IWY8 852 aaPredicted RBP9.41□□□□□ -0.9
ZNF541-204ENST00000487275 SLC44A5Q8NCS7 719 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 DPF2Q92785 391 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 LLPHQ9BRT6 129 aaKnown RBP9.41□□□□□ -0.9
ZNF541-204ENST00000487275 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 MYOZ2Q9NPC6 264 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 ZNF70Q9UC06 446 aaPredicted RBP9.41□□□□□ -0.9
ZNF541-204ENST00000487275 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 SWAP70Q9UH65 585 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 SERPINB13Q9UIV8 391 aa9.41□□□□□ -0.9
ZNF541-204ENST00000487275 DDX60LQ5H9U9 1706 aaKnown RBP9.4□□□□□ -0.9
ZNF541-204ENST00000487275 ZNF541Q9H0D2 1346 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 GOLGA8AA7E2F4 631 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 TCP10L2B9ZVM9 353 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 CPLX1O14810 134 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 YBX3P16989 372 aaKnown RBP eCLIP9.4□□□□□ -0.9
ZNF541-204ENST00000487275 RASA1P20936 1047 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
ZNF541-204ENST00000487275 HMGN5P82970 282 aaKnown RBP9.4□□□□□ -0.9
ZNF541-204ENST00000487275 RAB3GAP1Q15042 981 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 SEC23AQ15436 765 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 SPDYE2Q495Y8 402 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 CPLX2Q6PUV4 134 aaKnown RBP9.4□□□□□ -0.9
ZNF541-204ENST00000487275 APOA5Q6Q788 366 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 CATIPQ7Z7H3 387 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 MICU3Q86XE3 530 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 RAB11FIP4Q86YS3 637 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 ZFPM1Q8IX07 1006 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 MICALL2Q8IY33 904 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 CRACR2BQ8N4Y2 399 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms