RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 TREML2Q5T2D2 321 aa24.76■■□□□ 1.55
PHF1-208ENST00000486845 ZNF384Q8TF68 577 aa24.76■■□□□ 1.55
PHF1-208ENST00000486845 PAK6Q9NQU5 681 aaPredicted RBP24.76■■□□□ 1.55
PHF1-208ENST00000486845 HMG20BQ9P0W2 317 aa24.76■■□□□ 1.55
PHF1-208ENST00000486845 TAOK2Q9UL54 1235 aa24.76■■□□□ 1.55
PHF1-208ENST00000486845 LOC285556D6RIA3 1793 aa24.75■■□□□ 1.55
PHF1-208ENST00000486845 GORABQ5T7V8 394 aa24.75■■□□□ 1.55
PHF1-208ENST00000486845 NEUROD6Q96NK8 337 aa24.75■■□□□ 1.55
PHF1-208ENST00000486845 FAM196BA6NMK8 535 aa24.74■■□□□ 1.55
PHF1-208ENST00000486845 EVI5O60447 810 aa24.74■■□□□ 1.55
PHF1-208ENST00000486845 GCLCP48506 637 aaPredicted RBP24.74■■□□□ 1.55
PHF1-208ENST00000486845 SPP2Q13103 211 aa24.74■■□□□ 1.55
PHF1-208ENST00000486845 PABPC4Q13310 644 aaKnown RBP eCLIP24.74■■□□□ 1.552e-6■■□□□ 13.1
PHF1-208ENST00000486845 SPATA5Q8NB90 893 aa24.74■■□□□ 1.55
PHF1-208ENST00000486845 ZNF280CQ8ND82 737 aa24.74■■□□□ 1.55
PHF1-208ENST00000486845 ARHGAP45Q92619 1136 aa24.74■■□□□ 1.55
PHF1-208ENST00000486845 NSUN4Q96CB9 384 aaKnown RBP24.74■■□□□ 1.55
PHF1-208ENST00000486845 DOCK3Q8IZD9 2030 aa24.74■■□□□ 1.55
PHF1-208ENST00000486845 ATAD5Q96QE3 1844 aa24.73■■□□□ 1.55
PHF1-208ENST00000486845 CRISPLD2Q9H0B8 497 aa24.73■■□□□ 1.55
PHF1-208ENST00000486845 RAI14Q9P0K7 980 aa24.73■■□□□ 1.55
PHF1-208ENST00000486845 A0A1W2PPC1 479 aa24.72■■□□□ 1.55
PHF1-208ENST00000486845 RARSP54136 660 aaKnown RBP24.72■■□□□ 1.55
PHF1-208ENST00000486845 SZT2Q5T011 3432 aa24.72■■□□□ 1.55
PHF1-208ENST00000486845 ARID4AP29374 1257 aaPredicted RBP24.71■■□□□ 1.55
PHF1-208ENST00000486845 CAP2P40123 477 aa24.71■■□□□ 1.55
PHF1-208ENST00000486845 HMGCS2P54868 508 aa24.71■■□□□ 1.55
PHF1-208ENST00000486845 PI16Q6UXB8 463 aa24.71■■□□□ 1.55
PHF1-208ENST00000486845 TBC1D9Q6ZT07 1266 aa24.71■■□□□ 1.55
PHF1-208ENST00000486845 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.71■■□□□ 1.55
PHF1-208ENST00000486845 USP17L5A8MUK1 530 aa24.7■■□□□ 1.54
PHF1-208ENST00000486845 TEX11Q8IYF3 940 aa24.7■■□□□ 1.54
PHF1-208ENST00000486845 NOL10Q9BSC4 688 aaKnown RBP24.7■■□□□ 1.54
PHF1-208ENST00000486845 AS3MTQ9HBK9 375 aa24.7■■□□□ 1.54
PHF1-208ENST00000486845 HERC5Q9UII4 1024 aaKnown RBP24.7■■□□□ 1.54
PHF1-208ENST00000486845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.7■■□□□ 1.54
PHF1-208ENST00000486845 HMGCRP04035 888 aa24.69■■□□□ 1.54
PHF1-208ENST00000486845 SH3D19Q5HYK7 790 aa24.69■■□□□ 1.54
PHF1-208ENST00000486845 PAWRQ96IZ0 340 aaKnown RBP24.69■■□□□ 1.54
PHF1-208ENST00000486845 ASCC2Q9H1I8 757 aaPredicted RBP24.69■■□□□ 1.54
PHF1-208ENST00000486845 UQCRFS1P1P0C7P4 283 aa24.68■■□□□ 1.54
PHF1-208ENST00000486845 NECAB2Q7Z6G3 386 aa24.68■■□□□ 1.54
PHF1-208ENST00000486845 ANKLE1Q8NAG6 615 aa24.68■■□□□ 1.54
PHF1-208ENST00000486845 LRP2BPQ9P2M1 347 aa24.68■■□□□ 1.54
PHF1-208ENST00000486845 GNAI2P04899 355 aa24.67■■□□□ 1.54
PHF1-208ENST00000486845 G3BP1Q13283 466 aaKnown RBP eCLIP24.67■■□□□ 1.54
PHF1-208ENST00000486845 RRP1BQ14684 758 aaKnown RBP24.67■■□□□ 1.54
PHF1-208ENST00000486845 MCAMP43121 646 aa24.66■■□□□ 1.54
PHF1-208ENST00000486845 SH3RF3Q8TEJ3 882 aaPredicted RBP24.66■■□□□ 1.54
PHF1-208ENST00000486845 WDR18Q9BV38 432 aa24.66■■□□□ 1.54
PHF1-208ENST00000486845 DHX36Q9H2U1 1008 aaKnown RBP24.66■■□□□ 1.54
PHF1-208ENST00000486845 PI4KBQ9UBF8 816 aa24.66■■□□□ 1.54
PHF1-208ENST00000486845 MORF4L1Q9UBU8 362 aa24.66■■□□□ 1.54
PHF1-208ENST00000486845 GJD2Q9UKL4 321 aa24.66■■□□□ 1.54
PHF1-208ENST00000486845 MAST2Q6P0Q8 1798 aa24.65■■□□□ 1.54
PHF1-208ENST00000486845 ALPK3Q96L96 1907 aa24.65■■□□□ 1.54
PHF1-208ENST00000486845 IPO8O15397 1037 aaKnown RBP24.65■■□□□ 1.54
PHF1-208ENST00000486845 BAG3O95817 575 aa24.65■■□□□ 1.54
PHF1-208ENST00000486845 PLCG2P16885 1265 aa24.65■■□□□ 1.54
PHF1-208ENST00000486845 HMX1Q9NP08 348 aaPredicted RBP24.65■■□□□ 1.54
PHF1-208ENST00000486845 RPTORQ8N122 1335 aa24.64■■□□□ 1.54
PHF1-208ENST00000486845 ASNSP08243 561 aa24.64■■□□□ 1.54
PHF1-208ENST00000486845 IRX3P78415 501 aaPredicted RBP24.64■■□□□ 1.54
PHF1-208ENST00000486845 DIS3LQ8TF46 1054 aaKnown RBP24.64■■□□□ 1.54
PHF1-208ENST00000486845 TMOD4Q9NZQ9 345 aa24.64■■□□□ 1.54
PHF1-208ENST00000486845 MTMR2Q13614 643 aa24.63■■□□□ 1.53
PHF1-208ENST00000486845 NAA16Q6N069 864 aaPredicted RBP24.63■■□□□ 1.53
PHF1-208ENST00000486845 STAP2Q9UGK3 403 aa24.63■■□□□ 1.53
PHF1-208ENST00000486845 SIPA1L1O43166 1804 aa24.63■■□□□ 1.53
PHF1-208ENST00000486845 PNMA6EA0A0J9YXQ4 647 aa24.62■■□□□ 1.53
PHF1-208ENST00000486845 BACE1P56817 501 aa24.62■■□□□ 1.53
PHF1-208ENST00000486845 NBPF3Q9H094 633 aa24.62■■□□□ 1.53
PHF1-208ENST00000486845 AATFQ9NY61 560 aaKnown RBP eCLIP24.62■■□□□ 1.53
PHF1-208ENST00000486845 TRIM27P14373 513 aa24.61■■□□□ 1.53
PHF1-208ENST00000486845 HOXA7P31268 230 aaPredicted RBP24.61■■□□□ 1.53
PHF1-208ENST00000486845 TRIM34Q9BYJ4 488 aa24.61■■□□□ 1.53
PHF1-208ENST00000486845 GPR108Q9NPR9 543 aa24.61■■□□□ 1.53
PHF1-208ENST00000486845 GINM1Q9NU53 330 aa24.61■■□□□ 1.53
PHF1-208ENST00000486845 PLXNB2O15031 1838 aa24.61■■□□□ 1.53
PHF1-208ENST00000486845 PPP4CP60510 307 aa24.6■■□□□ 1.53
PHF1-208ENST00000486845 TRIM32Q13049 653 aa24.6■■□□□ 1.53
PHF1-208ENST00000486845 TTC39AQ5SRH9 613 aa24.6■■□□□ 1.53
PHF1-208ENST00000486845 ATF7IPQ6VMQ6 1270 aa24.6■■□□□ 1.53
PHF1-208ENST00000486845 FOXP4Q8IVH2 680 aaPredicted RBP24.6■■□□□ 1.53
PHF1-208ENST00000486845 C7orf61Q8IZ16 206 aa24.6■■□□□ 1.53
PHF1-208ENST00000486845 CRACR2BQ8N4Y2 399 aaPredicted RBP24.6■■□□□ 1.53
PHF1-208ENST00000486845 SOCS4Q8WXH5 440 aa24.6■■□□□ 1.53
PHF1-208ENST00000486845 SNRKQ9NRH2 765 aa24.6■■□□□ 1.53
PHF1-208ENST00000486845 FOCADQ5VW36 1801 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 C19orf81C9J6K1 198 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 SOX1O00570 391 aaPredicted RBP24.59■■□□□ 1.53
PHF1-208ENST00000486845 CCDC158Q5M9N0 1113 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 METTL16Q86W50 562 aaKnown RBP24.59■■□□□ 1.53
PHF1-208ENST00000486845 MAPKAPK5Q8IW41 473 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 GPRC5AQ8NFJ5 357 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 TGFBRAP1Q8WUH2 860 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 TRIB2Q92519 343 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 P2RX7Q99572 595 aaKnown RBP24.59■■□□□ 1.53
PHF1-208ENST00000486845 FLT1P17948 1338 aa24.59■■□□□ 1.53
PHF1-208ENST00000486845 DDX60LQ5H9U9 1706 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms