RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 BTDP43251 543 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 TFCP2Q12800 502 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 OS9Q13438 667 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-213ENST00000484112 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 CCDC102BQ68D86 513 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 COA7Q96BR5 231 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 DDX4Q9NQI0 724 aaKnown RBP12.25□□□□□ -0.45
CPSF4-213ENST00000484112 STAP2Q9UGK3 403 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 SLC45A1Q9Y2W3 748 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 FAM196BA6NMK8 535 aa12.24□□□□□ -0.45
CPSF4-213ENST00000484112 TIMM10P62072 90 aa12.24□□□□□ -0.45
CPSF4-213ENST00000484112 TREML2Q5T2D2 321 aa12.24□□□□□ -0.45
CPSF4-213ENST00000484112 ATRNL1Q5VV63 1379 aa12.24□□□□□ -0.45
CPSF4-213ENST00000484112 SLC17A8Q8NDX2 589 aa12.24□□□□□ -0.45
CPSF4-213ENST00000484112 PAWRQ96IZ0 340 aaKnown RBP12.24□□□□□ -0.45
CPSF4-213ENST00000484112 PRO3102Q9H379 93 aa12.24□□□□□ -0.45
CPSF4-213ENST00000484112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPSF4-213ENST00000484112 GAKO14976 1311 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 RAB11FIP3O75154 756 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 IRF5Q13568 498 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 RASGRF1Q13972 1273 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-213ENST00000484112 XAGE2Q96GT9 111 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 AGTPBP1Q9UPW5 1226 aa12.23□□□□□ -0.45
CPSF4-213ENST00000484112 DLL1O00548 723 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-213ENST00000484112 UQCRFS1P1P0C7P4 283 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 MAP3K10Q02779 954 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 SPP2Q13103 211 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 TNNI3KQ59H18 835 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 NECAB2Q7Z6G3 386 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 DIS3LQ8TF46 1054 aaKnown RBP12.22□□□□□ -0.45
CPSF4-213ENST00000484112 KIF1BPQ96EK5 621 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 ZNF512BQ96KM6 892 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-213ENST00000484112 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.22□□□□□ -0.45
CPSF4-213ENST00000484112 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-213ENST00000484112 FPGT-TNNI3KV9GXZ4 949 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 MGAMO43451 1857 aa12.22□□□□□ -0.45
CPSF4-213ENST00000484112 MROH7-TTC4A0A0A0MT08 1334 aa12.21□□□□□ -0.45
CPSF4-213ENST00000484112 ARID4AP29374 1257 aaPredicted RBP12.21□□□□□ -0.45
CPSF4-213ENST00000484112 MECOMQ03112 1051 aa12.21□□□□□ -0.45
CPSF4-213ENST00000484112 CCDC158Q5M9N0 1113 aa12.21□□□□□ -0.45
CPSF4-213ENST00000484112 GORABQ5T7V8 394 aa12.21□□□□□ -0.45
CPSF4-213ENST00000484112 SIRT2Q8IXJ6 389 aa12.21□□□□□ -0.45
CPSF4-213ENST00000484112 C7orf61Q8IZ16 206 aa12.21□□□□□ -0.45
CPSF4-213ENST00000484112 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
CPSF4-213ENST00000484112 NEUROD6Q96NK8 337 aa12.21□□□□□ -0.45
CPSF4-213ENST00000484112 ZMYND8Q9ULU4 1186 aaPredicted RBP12.21□□□□□ -0.45
CPSF4-213ENST00000484112 DOCK2Q92608 1830 aa12.21□□□□□ -0.46
CPSF4-213ENST00000484112 CEP290O15078 2479 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 MYH2Q9UKX2 1941 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 GPR75-ASB3A0A0A6YYF3 556 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 A0A1W2PPC1 479 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 TBC1D12O60347 775 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 CAPN2P17655 700 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 HMGCS2P54868 508 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 RHBDL3P58872 404 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 TRIM32Q13049 653 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 TBC1D9Q6ZT07 1266 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 ZNF280CQ8ND82 737 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 CRISPLD2Q9H0B8 497 aa12.2□□□□□ -0.46
CPSF4-213ENST00000484112 OSBPL5Q9H0X9 879 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-213ENST00000484112 HMGCRP04035 888 aa12.19□□□□□ -0.46
CPSF4-213ENST00000484112 SYN1P17600 705 aa12.19□□□□□ -0.46
CPSF4-213ENST00000484112 GCLCP48506 637 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-213ENST00000484112 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPSF4-213ENST00000484112 TMED8Q6PL24 325 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-213ENST00000484112 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
CPSF4-213ENST00000484112 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-213ENST00000484112 RHPN1Q8TCX5 695 aa12.19□□□□□ -0.46
CPSF4-213ENST00000484112 HMX1Q9NP08 348 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-213ENST00000484112 RAI14Q9P0K7 980 aa12.19□□□□□ -0.46
CPSF4-213ENST00000484112 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
CPSF4-213ENST00000484112 USP17L5A8MUK1 530 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 LDHCP07864 332 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 CYP2B6P20813 491 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 CAP2P40123 477 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 GSTO1P78417 241 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 PI16Q6UXB8 463 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 SPATA5Q8NB90 893 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 ASCC2Q9H1I8 757 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-213ENST00000484112 AS3MTQ9HBK9 375 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-213ENST00000484112 DOCK1Q14185 1865 aa12.18□□□□□ -0.46
CPSF4-213ENST00000484112 RPTORQ8N122 1335 aa12.17□□□□□ -0.46
CPSF4-213ENST00000484112 PEX10O60683 326 aa12.17□□□□□ -0.46
CPSF4-213ENST00000484112 IRX3P78415 501 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-213ENST00000484112 RRP1BQ14684 758 aaKnown RBP12.17□□□□□ -0.46
CPSF4-213ENST00000484112 TTC39AQ5SRH9 613 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms