RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 SPDYE6P0CI01 402 aa19.08■□□□□ 0.65
RFTN1-209ENST00000483671 LMNB1P20700 586 aa19.08■□□□□ 0.65
RFTN1-209ENST00000483671 ZNF280AP59817 542 aaPredicted RBP19.08■□□□□ 0.65
RFTN1-209ENST00000483671 C16orf86Q6ZW13 317 aa19.08■□□□□ 0.65
RFTN1-209ENST00000483671 TTC6Q86TZ1 520 aa19.08■□□□□ 0.65
RFTN1-209ENST00000483671 ZBED3Q96IU2 234 aaPredicted RBP19.08■□□□□ 0.65
RFTN1-209ENST00000483671 PDIA3P30101 505 aaKnown RBP19.07■□□□□ 0.64
RFTN1-209ENST00000483671 PLCD1P51178 756 aa19.07■□□□□ 0.64
RFTN1-209ENST00000483671 RBM5P52756 815 aaKnown RBP eCLIP19.07■□□□□ 0.64
RFTN1-209ENST00000483671 RCAN1P53805 252 aa19.07■□□□□ 0.64
RFTN1-209ENST00000483671 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
RFTN1-209ENST00000483671 EVX2Q03828 476 aa19.07■□□□□ 0.64
RFTN1-209ENST00000483671 APOBRQ0VD83 1088 aa19.07■□□□□ 0.64
RFTN1-209ENST00000483671 TMTC2Q8N394 836 aa19.07■□□□□ 0.64
RFTN1-209ENST00000483671 DPF2Q92785 391 aa19.07■□□□□ 0.64
RFTN1-209ENST00000483671 LY9Q9HBG7 655 aa19.07■□□□□ 0.64
RFTN1-209ENST00000483671 SAP30BPQ9UHR5 308 aaKnown RBP19.07■□□□□ 0.64
RFTN1-209ENST00000483671 ZBTB12Q9Y330 459 aaPredicted RBP19.07■□□□□ 0.64
RFTN1-209ENST00000483671 DICER1Q9UPY3 1922 aaKnown RBP19.07■□□□□ 0.64
RFTN1-209ENST00000483671 ENTPD3O75355 529 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 GABPAQ06546 454 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 DLGAP5Q15398 846 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 SEC23AQ15436 765 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 TMEM67Q5HYA8 995 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 RRP12Q5JTH9 1297 aaKnown RBP19.06■□□□□ 0.64
RFTN1-209ENST00000483671 FKBP1CQ5VVH2 108 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 ARHGAP27Q6ZUM4 889 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 CCDC83Q8IWF9 413 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 PRMT6Q96LA8 375 aaPredicted RBP19.06■□□□□ 0.64
RFTN1-209ENST00000483671 LLPHQ9BRT6 129 aaKnown RBP19.06■□□□□ 0.64
RFTN1-209ENST00000483671 EHD4Q9H223 541 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 DHX36Q9H2U1 1008 aaKnown RBP19.06■□□□□ 0.64
RFTN1-209ENST00000483671 GPHNQ9NQX3 736 aaPredicted RBP19.06■□□□□ 0.64
RFTN1-209ENST00000483671 TOMM22Q9NS69 142 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 FOXD4L1Q9NU39 408 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 PCDHAC2Q9Y5I4 1007 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 NID2Q14112 1375 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 ATRNL1Q5VV63 1379 aa19.06■□□□□ 0.64
RFTN1-209ENST00000483671 IFIT3O14879 490 aaKnown RBP19.05■□□□□ 0.64
RFTN1-209ENST00000483671 NFIAQ12857 509 aa19.05■□□□□ 0.64
RFTN1-209ENST00000483671 IQCA1Q86XH1 822 aa19.05■□□□□ 0.64
RFTN1-209ENST00000483671 NECAB1Q8N987 351 aa19.05■□□□□ 0.64
RFTN1-209ENST00000483671 UBAC1Q9BSL1 405 aa19.05■□□□□ 0.64
RFTN1-209ENST00000483671 FAM198AQ9UFP1 575 aa19.05■□□□□ 0.64
RFTN1-209ENST00000483671 BRPF3Q9ULD4 1205 aa19.05■□□□□ 0.64
RFTN1-209ENST00000483671 KLF18A0A0U1RQI7 1052 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 ERICH2A1L162 156 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 RANBP6O60518 1105 aaKnown RBP19.04■□□□□ 0.64
RFTN1-209ENST00000483671 PRDM1O75626 825 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 SCRN1Q12765 414 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 PICALMQ13492 652 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 SPDYE2Q495Y8 402 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 CCDC178Q5BJE1 867 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 DYNLL2Q96FJ2 89 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 ZSCAN10Q96SZ4 725 aaPredicted RBP19.04■□□□□ 0.64
RFTN1-209ENST00000483671 TCP11L1Q9NUJ3 509 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 HPS5Q9UPZ3 1129 aa19.04■□□□□ 0.64
RFTN1-209ENST00000483671 SBF1O95248 1867 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 PDIA4P13667 645 aaKnown RBP19.03■□□□□ 0.64
RFTN1-209ENST00000483671 CDK8P49336 464 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 NUCB2P80303 420 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 WTAPQ15007 396 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 APOA5Q6Q788 366 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 TDRD3Q9H7E2 651 aaKnown RBP19.03■□□□□ 0.64
RFTN1-209ENST00000483671 SWAP70Q9UH65 585 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 SMC3Q9UQE7 1217 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 TNKSO95271 1327 aa19.03■□□□□ 0.64
RFTN1-209ENST00000483671 HLA-DOAP06340 250 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 YBX3P16989 372 aaKnown RBP eCLIP19.02■□□□□ 0.64
RFTN1-209ENST00000483671 RASA1P20936 1047 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 RAB3GAP1Q15042 981 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 METTL16Q86W50 562 aaKnown RBP19.02■□□□□ 0.64
RFTN1-209ENST00000483671 STK11IPQ8N1F8 1099 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.64
RFTN1-209ENST00000483671 SMARCC2Q8TAQ2 1214 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 ANKS1AQ92625 1134 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 MKNK2Q9HBH9 465 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 TMOD2Q9NZR1 351 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 ZNF70Q9UC06 446 aaPredicted RBP19.02■□□□□ 0.64
RFTN1-209ENST00000483671 SERPINB13Q9UIV8 391 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 PLIN4Q96Q06 1357 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 ZNF541Q9H0D2 1346 aa19.02■□□□□ 0.64
RFTN1-209ENST00000483671 GOLGA8BA8MQT2 603 aa19.01■□□□□ 0.63
RFTN1-209ENST00000483671 DHX16O60231 1041 aaKnown RBP19.01■□□□□ 0.63
RFTN1-209ENST00000483671 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
RFTN1-209ENST00000483671 STK3Q13188 491 aa19.01■□□□□ 0.63
RFTN1-209ENST00000483671 SENP2Q9HC62 589 aa19.01■□□□□ 0.63
RFTN1-209ENST00000483671 MYOZ2Q9NPC6 264 aa19.01■□□□□ 0.63
RFTN1-209ENST00000483671 CCDC69A6NI79 296 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 TSPY2A6NKD2 308 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 TFAP4Q01664 338 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 DGKHQ86XP1 1220 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 ZFPM1Q8IX07 1006 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 ZNF444Q8N0Y2 327 aaPredicted RBP19■□□□□ 0.63
RFTN1-209ENST00000483671 GPC2Q8N158 579 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 SLC44A5Q8NCS7 719 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 NEDD1Q8NHV4 660 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 SLC12A7Q9Y666 1083 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 ZBTB43O43298 467 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms