RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 EHD4Q9H223 541 aa5.5□□□□□ -1.53
HDAC9-224ENST00000483142 TAF1DQ9H5J8 278 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-224ENST00000483142 ATP8A2Q9NTI2 1148 aa5.5□□□□□ -1.53
HDAC9-224ENST00000483142 ARPP21Q9UBL0 812 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-224ENST00000483142 HACL1Q9UJ83 578 aa5.5□□□□□ -1.53
HDAC9-224ENST00000483142 LOC285556D6RIA3 1793 aa5.5□□□□□ -1.53
HDAC9-224ENST00000483142 SRCAPQ6ZRS2 3230 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 MAGEB6P1A0A0J9YX57 407 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 GSG1L2A8MUP6 293 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 REC8O95072 547 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 SLC34A2O95436 690 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 C7P10643 843 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 HSPD1P10809 573 aaKnown RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 LMOD1P29536 600 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 EPS15P42566 896 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 HIRAP54198 1017 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 TNFAIP1Q13829 316 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 DLGAP5Q15398 846 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 SLFNL1Q499Z3 407 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 SBK1Q52WX2 424 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 PNMA8AQ86V59 439 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 METTL16Q86W50 562 aaKnown RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 APOBEC3FQ8IUX4 373 aaKnown RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 OGFOD1Q8N543 542 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 MAP4K1Q92918 833 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 FBXW7Q969H0 707 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 AIDAQ96BJ3 306 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 SEC62Q99442 399 aaKnown RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 CRNKL1Q9BZJ0 848 aaKnown RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 OSBPL5Q9H0X9 879 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 ARMT1Q9H993 441 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 DCP1AQ9NPI6 582 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 DDX4Q9NQI0 724 aaKnown RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 AATFQ9NY61 560 aaKnown RBP eCLIP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 ZNF70Q9UC06 446 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 FAM198AQ9UFP1 575 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 CNOT7Q9UIV1 285 aaKnown RBP5.49□□□□□ -1.53
HDAC9-224ENST00000483142 ANAPC4Q9UJX5 808 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 PCDHAC2Q9Y5I4 1007 aa5.49□□□□□ -1.53
HDAC9-224ENST00000483142 PHIPQ8WWQ0 1821 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 PTPRFP10586 1907 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 F8W031 263 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 H7C1D1 291 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 FGRP09769 529 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 PCP11498 1178 aaKnown RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 EPHX2P34913 555 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 HSPA4P34932 840 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 RBM25P49756 843 aaKnown RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 DYNLL1P63167 89 aaKnown RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 MAP3K10Q02779 954 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 GABPAQ06546 454 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 NFIAQ12857 509 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 TSGA10IPQ3SY00 556 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 VPS53Q5VIR6 699 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 CWC27Q6UX04 472 aaKnown RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 CCDC129Q6ZRS4 1044 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 TEX11Q8IYF3 940 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 MIGA1Q8NAN2 632 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 SH3RF3Q8TEJ3 882 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 FAM151AQ8WW52 585 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 PRMT6Q96LA8 375 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 TEPSINQ96N21 525 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 NOL10Q9BSC4 688 aaKnown RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 BACH2Q9BYV9 841 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 NBPF3Q9H094 633 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 DHX36Q9H2U1 1008 aaKnown RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 DNAJC18Q9H819 358 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 GPBP1L1Q9HC44 474 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 GGA3Q9NZ52 723 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 TMOD2Q9NZR1 351 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 METRNQ9UJH8 293 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.48□□□□□ -1.53
HDAC9-224ENST00000483142 GJA3Q9Y6H8 435 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 A0A0G2JMZ2 1700 aa5.48□□□□□ -1.53
HDAC9-224ENST00000483142 PATL2C9JE40 543 aaKnown RBP5.47□□□□□ -1.53
HDAC9-224ENST00000483142 PRKAB2O43741 272 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 MYO1BO43795 1136 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 ORC4O43929 436 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 TBC1D12O60347 775 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 FECHP22830 423 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 ANAPC15P60006 121 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 MAP3K9P80192 1104 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 PTH1RQ03431 593 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 NECTIN1Q15223 517 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 MAP3K11Q16584 847 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 NBPF9Q3BBW0 867 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 TBC1D10BQ4KMP7 808 aaPredicted RBP5.47□□□□□ -1.53
HDAC9-224ENST00000483142 C12orf60Q5U649 245 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 SAMD7Q7Z3H4 446 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 LDHDQ86WU2 507 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 IFNL3Q8IZI9 196 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 IL27Q8NEV9 243 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 SDR42E1Q8WUS8 393 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 STAG1Q8WVM7 1258 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 MTA3Q9BTC8 594 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 TDRD3Q9H7E2 651 aaKnown RBP5.47□□□□□ -1.53
HDAC9-224ENST00000483142 NMRK2Q9NPI5 230 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 GOLGB1Q14789 3259 aaKnown RBP5.47□□□□□ -1.53
HDAC9-224ENST00000483142 ASTN2O75129 1339 aaPredicted RBP5.47□□□□□ -1.53
HDAC9-224ENST00000483142 WDR19Q8NEZ3 1342 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms