RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	PROCA1	Q8NCQ7	364 aa	Predicted RBP	31.2	■■■□□ 2.59
STK40-208	ENST00000482458	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.2	■■■□□ 2.59
STK40-208	ENST00000482458	PAK6	Q9NQU5	681 aa	Predicted RBP	31.2	■■■□□ 2.59
STK40-208	ENST00000482458	EVI5	O60447	810 aa		31.19	■■■□□ 2.58
STK40-208	ENST00000482458	LDHC	P07864	332 aa		31.19	■■■□□ 2.58
STK40-208	ENST00000482458	GNAI3	P08754	354 aa		31.19	■■■□□ 2.58
STK40-208	ENST00000482458	PI16	Q6UXB8	463 aa		31.19	■■■□□ 2.58
STK40-208	ENST00000482458	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	31.19	■■■□□ 2.58
STK40-208	ENST00000482458	MAP4K4	O95819	1239 aa	Predicted RBP	31.18	■■■□□ 2.58
STK40-208	ENST00000482458	TBC1D9	Q6ZT07	1266 aa		31.18	■■■□□ 2.58
STK40-208	ENST00000482458	SPATA5	Q8NB90	893 aa		31.18	■■■□□ 2.58
STK40-208	ENST00000482458	ZNF280C	Q8ND82	737 aa		31.18	■■■□□ 2.58
STK40-208	ENST00000482458	NSUN4	Q96CB9	384 aa	Known RBP	31.18	■■■□□ 2.58
STK40-208	ENST00000482458	MTX1	Q13505	466 aa		31.17	■■■□□ 2.58
STK40-208	ENST00000482458	GORAB	Q5T7V8	394 aa		31.17	■■■□□ 2.58
STK40-208	ENST00000482458	CRISPLD2	Q9H0B8	497 aa		31.17	■■■□□ 2.58
STK40-208	ENST00000482458	HMGCS2	P54868	508 aa		31.16	■■■□□ 2.58
STK40-208	ENST00000482458	RAI14	Q9P0K7	980 aa		31.16	■■■□□ 2.58
STK40-208	ENST00000482458	COL2A1	P02458	1487 aa	Predicted RBP	31.15	■■■□□ 2.58
STK40-208	ENST00000482458	CAP2	P40123	477 aa		31.15	■■■□□ 2.58
STK40-208	ENST00000482458	GCLC	P48506	637 aa	Predicted RBP	31.15	■■■□□ 2.58
STK40-208	ENST00000482458	RARS	P54136	660 aa	Known RBP	31.15	■■■□□ 2.58
STK40-208	ENST00000482458	TBC1D2	Q9BYX2	928 aa		31.15	■■■□□ 2.58
STK40-208	ENST00000482458	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	31.15	■■■□□ 2.58	2e-15	■■■□□ 18
STK40-208	ENST00000482458	PABPC4	Q13310	644 aa	Known RBP eCLIP	31.14	■■■□□ 2.58	3e-6	■□□□□ 9
STK40-208	ENST00000482458	PAWR	Q96IZ0	340 aa	Known RBP	31.14	■■■□□ 2.58
STK40-208	ENST00000482458	ARID4A	P29374	1257 aa	Predicted RBP	31.13	■■■□□ 2.57
STK40-208	ENST00000482458	RRP1B	Q14684	758 aa	Known RBP	31.13	■■■□□ 2.57
STK40-208	ENST00000482458	TEX11	Q8IYF3	940 aa		31.13	■■■□□ 2.57
STK40-208	ENST00000482458	ARHGAP45	Q92619	1136 aa		31.13	■■■□□ 2.57
STK40-208	ENST00000482458	USP17L5	A8MUK1	530 aa		31.12	■■■□□ 2.57
STK40-208	ENST00000482458	ASCC2	Q9H1I8	757 aa	Predicted RBP	31.12	■■■□□ 2.57
STK40-208	ENST00000482458	LOC285556	D6RIA3	1793 aa		31.12	■■■□□ 2.57
STK40-208	ENST00000482458		A0A1W2PPC1	479 aa		31.11	■■■□□ 2.57
STK40-208	ENST00000482458	HMGCR	P04035	888 aa		31.11	■■■□□ 2.57
STK40-208	ENST00000482458	NECAB2	Q7Z6G3	386 aa		31.11	■■■□□ 2.57
STK40-208	ENST00000482458	DOCK3	Q8IZD9	2030 aa		31.11	■■■□□ 2.57
STK40-208	ENST00000482458	DIS3L	Q8TF46	1054 aa	Known RBP	31.11	■■■□□ 2.57
STK40-208	ENST00000482458	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.1	■■■□□ 2.57
STK40-208	ENST00000482458	AS3MT	Q9HBK9	375 aa		31.1	■■■□□ 2.57
STK40-208	ENST00000482458	LRP2BP	Q9P2M1	347 aa		31.1	■■■□□ 2.57
STK40-208	ENST00000482458	STAP2	Q9UGK3	403 aa		31.1	■■■□□ 2.57
STK40-208	ENST00000482458	HERC5	Q9UII4	1024 aa	Known RBP	31.1	■■■□□ 2.57
STK40-208	ENST00000482458	MCAM	P43121	646 aa		31.09	■■■□□ 2.57
STK40-208	ENST00000482458	SH3D19	Q5HYK7	790 aa		31.09	■■■□□ 2.57
STK40-208	ENST00000482458	NOL10	Q9BSC4	688 aa	Known RBP	31.09	■■■□□ 2.57
STK40-208	ENST00000482458	GJD2	Q9UKL4	321 aa		31.09	■■■□□ 2.57
STK40-208	ENST00000482458	UQCRFS1P1	P0C7P4	283 aa		31.08	■■■□□ 2.57
STK40-208	ENST00000482458	G3BP1	Q13283	466 aa	Known RBP eCLIP	31.07	■■■□□ 2.56
STK40-208	ENST00000482458	PI4KB	Q9UBF8	816 aa		31.07	■■■□□ 2.56
STK40-208	ENST00000482458	ATAD5	Q96QE3	1844 aa		31.06	■■■□□ 2.56
STK40-208	ENST00000482458	GNAI2	P04899	355 aa		31.06	■■■□□ 2.56
STK40-208	ENST00000482458	TRIM32	Q13049	653 aa		31.06	■■■□□ 2.56
STK40-208	ENST00000482458	ANKLE1	Q8NAG6	615 aa		31.06	■■■□□ 2.56
STK40-208	ENST00000482458	WDR18	Q9BV38	432 aa		31.06	■■■□□ 2.56
STK40-208	ENST00000482458	HMX1	Q9NP08	348 aa	Predicted RBP	31.06	■■■□□ 2.56
STK40-208	ENST00000482458	MORF4L1	Q9UBU8	362 aa		31.06	■■■□□ 2.56
STK40-208	ENST00000482458	RPTOR	Q8N122	1335 aa		31.05	■■■□□ 2.56
STK40-208	ENST00000482458	PNMA6E	A0A0J9YXQ4	647 aa		31.05	■■■□□ 2.56
STK40-208	ENST00000482458	SOX1	O00570	391 aa	Predicted RBP	31.05	■■■□□ 2.56
STK40-208	ENST00000482458	IRX3	P78415	501 aa	Predicted RBP	31.05	■■■□□ 2.56
STK40-208	ENST00000482458	MTMR2	Q13614	643 aa		31.05	■■■□□ 2.56
STK40-208	ENST00000482458	DHX36	Q9H2U1	1008 aa	Known RBP	31.05	■■■□□ 2.56
STK40-208	ENST00000482458	NAA16	Q6N069	864 aa	Predicted RBP	31.04	■■■□□ 2.56
STK40-208	ENST00000482458	C7orf61	Q8IZ16	206 aa		31.04	■■■□□ 2.56
STK40-208	ENST00000482458	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.04	■■■□□ 2.56
STK40-208	ENST00000482458	TMOD4	Q9NZQ9	345 aa		31.04	■■■□□ 2.56
STK40-208	ENST00000482458	BAG3	O95817	575 aa		31.03	■■■□□ 2.56
STK40-208	ENST00000482458	BACE1	P56817	501 aa		31.03	■■■□□ 2.56
STK40-208	ENST00000482458	SNRK	Q9NRH2	765 aa		31.03	■■■□□ 2.56
STK40-208	ENST00000482458	IPO8	O15397	1037 aa	Known RBP	31.02	■■■□□ 2.56
STK40-208	ENST00000482458	ASNS	P08243	561 aa		31.02	■■■□□ 2.56
STK40-208	ENST00000482458	PLCG2	P16885	1265 aa		31.02	■■■□□ 2.56
STK40-208	ENST00000482458	TRIB2	Q92519	343 aa		31.02	■■■□□ 2.56
STK40-208	ENST00000482458	LRCH3	Q96II8	777 aa		31.02	■■■□□ 2.56
STK40-208	ENST00000482458	NBPF3	Q9H094	633 aa		31.02	■■■□□ 2.56
STK40-208	ENST00000482458	TNN	Q9UQP3	1299 aa		31.02	■■■□□ 2.56
STK40-208	ENST00000482458	ALPK3	Q96L96	1907 aa		31.01	■■■□□ 2.55
STK40-208	ENST00000482458	TRIM27	P14373	513 aa		31.01	■■■□□ 2.55
STK40-208	ENST00000482458	JAG1	P78504	1218 aa		31.01	■■■□□ 2.55
STK40-208	ENST00000482458	MAPKAPK5	Q8IW41	473 aa		31.01	■■■□□ 2.55
STK40-208	ENST00000482458	TGFBRAP1	Q8WUH2	860 aa		31.01	■■■□□ 2.55
STK40-208	ENST00000482458	P2RX7	Q99572	595 aa	Known RBP	31.01	■■■□□ 2.55
STK40-208	ENST00000482458	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	31.01	■■■□□ 2.55
STK40-208	ENST00000482458	PEX10	O60683	326 aa		31	■■■□□ 2.55
STK40-208	ENST00000482458	CYP2B6	P20813	491 aa		31	■■■□□ 2.55
STK40-208	ENST00000482458	HOXA7	P31268	230 aa	Predicted RBP	31	■■■□□ 2.55
STK40-208	ENST00000482458	TTC39A	Q5SRH9	613 aa		31	■■■□□ 2.55
STK40-208	ENST00000482458	DNAJC18	Q9H819	358 aa		31	■■■□□ 2.55
STK40-208	ENST00000482458	MNX1	P50219	401 aa	Predicted RBP	30.99	■■■□□ 2.55
STK40-208	ENST00000482458	PPP4C	P60510	307 aa		30.99	■■■□□ 2.55
STK40-208	ENST00000482458	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	30.99	■■■□□ 2.55
STK40-208	ENST00000482458	GPRC5A	Q8NFJ5	357 aa		30.99	■■■□□ 2.55
STK40-208	ENST00000482458	GDF15	Q99988	308 aa		30.99	■■■□□ 2.55
STK40-208	ENST00000482458	TRIM34	Q9BYJ4	488 aa		30.99	■■■□□ 2.55
STK40-208	ENST00000482458	FLT1	P17948	1338 aa		30.98	■■■□□ 2.55
STK40-208	ENST00000482458	SIPA1L1	O43166	1804 aa		30.98	■■■□□ 2.55
STK40-208	ENST00000482458	HERVK_113	P62684	666 aa		30.98	■■■□□ 2.55
STK40-208	ENST00000482458	SHROOM1	Q2M3G4	852 aa	Predicted RBP	30.98	■■■□□ 2.55
STK40-208	ENST00000482458	ATF7IP	Q6VMQ6	1270 aa		30.98	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms