RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 ENTPD3O75355 529 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 SLURP2P0DP57 97 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 ZKSCAN1P17029 563 aaPredicted RBP11.93□□□□□ -0.5
TMEM40-207ENST00000480698 DNAJB2P25686 324 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 EPHB4P54760 987 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 MRPS5P82675 430 aaKnown RBP11.93□□□□□ -0.5
TMEM40-207ENST00000480698 CCL14Q16627 93 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 CCDC57Q2TAC2 916 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 POTEEQ6S8J3 1075 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 CCDC84Q86UT8 332 aaPredicted RBP11.93□□□□□ -0.5
TMEM40-207ENST00000480698 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 LPAR1Q92633 364 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 PUS3Q9BZE2 481 aaKnown RBP11.93□□□□□ -0.5
TMEM40-207ENST00000480698 ASCC2Q9H1I8 757 aaPredicted RBP11.93□□□□□ -0.5
TMEM40-207ENST00000480698 PRKAG2Q9UGJ0 569 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 HCN4Q9Y3Q4 1203 aa11.93□□□□□ -0.5
TMEM40-207ENST00000480698 MYH13Q9UKX3 1938 aa11.92□□□□□ -0.5
TMEM40-207ENST00000480698 TRIM43BA6NCK2 446 aa11.92□□□□□ -0.5
TMEM40-207ENST00000480698 FLIIQ13045 1269 aa11.92□□□□□ -0.5
TMEM40-207ENST00000480698 TRIM43Q96BQ3 446 aaPredicted RBP11.92□□□□□ -0.5
TMEM40-207ENST00000480698 APBA2Q99767 749 aa11.92□□□□□ -0.5
TMEM40-207ENST00000480698 ZNF576Q9H609 170 aa11.92□□□□□ -0.5
TMEM40-207ENST00000480698 TXNRD2Q9NNW7 524 aa11.92□□□□□ -0.5
TMEM40-207ENST00000480698 TRANK1O15050 2925 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 MROH5Q6ZUA9 1318 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 ATAD5Q96QE3 1844 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 MSCO60682 206 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 BMP1P13497 986 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 ITGB8P26012 769 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 ATN1P54259 1190 aaPredicted RBP11.91□□□□□ -0.5
TMEM40-207ENST00000480698 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 SH3RF1Q7Z6J0 888 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 C11orf16Q9NQ32 467 aa11.91□□□□□ -0.5
TMEM40-207ENST00000480698 DDX20Q9UHI6 824 aaKnown RBP11.91□□□□□ -0.5
TMEM40-207ENST00000480698 CACNA1FO60840 1977 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 UTYO14607 1347 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 DDTLA6NHG4 134 aaPredicted RBP11.9□□□□□ -0.5
TMEM40-207ENST00000480698 ZBTB22O15209 634 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 TBC1D12O60347 775 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 FGFR2P21802 821 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 HOXA7P31268 230 aaPredicted RBP11.9□□□□□ -0.5
TMEM40-207ENST00000480698 RGS2P41220 211 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 RGS3P49796 1198 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.5
TMEM40-207ENST00000480698 ADGRE1Q14246 886 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 BEND3Q5T5X7 828 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 SLC39A5Q6ZMH5 540 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 NECAB3Q96P71 396 aaPredicted RBP11.9□□□□□ -0.5
TMEM40-207ENST00000480698 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 WDFY4Q6ZS81 3184 aa11.9□□□□□ -0.5
TMEM40-207ENST00000480698 GAKO14976 1311 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 PEX10O60683 326 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 PDE8BO95263 885 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 PRDX5P30044 214 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 MAPK4P31152 587 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 GPR142Q7Z601 462 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 RNPC3Q96LT9 517 aaKnown RBP11.89□□□□□ -0.51
TMEM40-207ENST00000480698 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 PORCNQ9H237 461 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 FLRT1Q9NZU1 646 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
TMEM40-207ENST00000480698 RBPJLQ9UBG7 517 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 ATP11BQ9Y2G3 1177 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 CHMP3Q9Y3E7 222 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 CACNA1AO00555 2505 aa11.89□□□□□ -0.51
TMEM40-207ENST00000480698 SALL1Q9NSC2 1324 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 USP34Q70CQ2 3546 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.88□□□□□ -0.51
TMEM40-207ENST00000480698 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.88□□□□□ -0.51
TMEM40-207ENST00000480698 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 HOXC6P09630 235 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 HMGCS2P54868 508 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 CALD1Q05682 793 aaKnown RBP11.88□□□□□ -0.51
TMEM40-207ENST00000480698 SPP2Q13103 211 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 PDE3AQ14432 1141 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 TRIM60Q495X7 471 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 ALYREFQ86V81 257 aaKnown RBP11.88□□□□□ -0.51
TMEM40-207ENST00000480698 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 TRPV1Q8NER1 839 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 TIFAQ96CG3 184 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 OSBPL5Q9H0X9 879 aaPredicted RBP11.88□□□□□ -0.51
TMEM40-207ENST00000480698 EPHX3Q9H6B9 360 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 DDX4Q9NQI0 724 aaKnown RBP11.88□□□□□ -0.51
TMEM40-207ENST00000480698 USP40Q9NVE5 1235 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 LRRFIP2Q9Y608 721 aaKnown RBP11.88□□□□□ -0.51
TMEM40-207ENST00000480698 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
TMEM40-207ENST00000480698 MYBBP1AQ9BQG0 1328 aaKnown RBP11.87□□□□□ -0.51
TMEM40-207ENST00000480698 TCF20Q9UGU0 1960 aaKnown RBP11.87□□□□□ -0.51
TMEM40-207ENST00000480698 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
TMEM40-207ENST00000480698 GRM8O00222 908 aa11.87□□□□□ -0.51
TMEM40-207ENST00000480698 GPR37L1O60883 481 aa11.87□□□□□ -0.51
TMEM40-207ENST00000480698 CYBAP13498 195 aa11.87□□□□□ -0.51
TMEM40-207ENST00000480698 HERVK_113P62684 666 aa11.87□□□□□ -0.51
TMEM40-207ENST00000480698 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms