RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 ELMO3Q96BJ8 720 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 NECAB3Q96P71 396 aaPredicted RBP6.36□□□□□ -1.39
VLDLR-204ENST00000478776 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 PRDM5Q9NQX1 630 aaPredicted RBP6.36□□□□□ -1.39
VLDLR-204ENST00000478776 DCTN4Q9UJW0 460 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 FAM155AB1AL88 458 aaPredicted RBP6.35□□□□□ -1.39
VLDLR-204ENST00000478776 TRIM37O94972 964 aa6.35□□□□□ -1.39
VLDLR-204ENST00000478776 CLCN7P51798 805 aa6.35□□□□□ -1.39
VLDLR-204ENST00000478776 LLGL2Q6P1M3 1020 aa6.35□□□□□ -1.39
VLDLR-204ENST00000478776 MPZL3Q6UWV2 235 aa6.35□□□□□ -1.39
VLDLR-204ENST00000478776 SPACA3Q8IXA5 215 aa6.35□□□□□ -1.39
VLDLR-204ENST00000478776 BHLHE22Q8NFJ8 381 aaPredicted RBP6.35□□□□□ -1.39
VLDLR-204ENST00000478776 PCDHA4Q9UN74 947 aa6.35□□□□□ -1.39
VLDLR-204ENST00000478776 SOWAHDA6NJG2 315 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 RAP1GAPP47736 663 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 NKPD1Q17RQ9 610 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 MPRIPQ6WCQ1 1025 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 FAM214BQ7L5A3 538 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 ZNF507Q8TCN5 953 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 GRIN3AQ8TCU5 1115 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 TOX2Q96NM4 488 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 PPP1R16BQ96T49 567 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 LMCD1Q9NZU5 365 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
VLDLR-204ENST00000478776 CTNND2Q9UQB3 1225 aa6.34□□□□□ -1.39
VLDLR-204ENST00000478776 MAPK1P28482 360 aa6.33□□□□□ -1.4
VLDLR-204ENST00000478776 MESP2Q0VG99 397 aa6.33□□□□□ -1.4
VLDLR-204ENST00000478776 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
VLDLR-204ENST00000478776 ZBTB37Q5TC79 503 aa6.33□□□□□ -1.4
VLDLR-204ENST00000478776 CYFIP1Q7L576 1253 aa6.33□□□□□ -1.4
VLDLR-204ENST00000478776 SRCIN1Q9C0H9 1055 aa6.33□□□□□ -1.4
VLDLR-204ENST00000478776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.33□□□□□ -1.4
VLDLR-204ENST00000478776 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
VLDLR-204ENST00000478776 PITPNM2Q9BZ72 1349 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 ZNF503-AS2A6NEH8 195 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 BMP6P22004 513 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
VLDLR-204ENST00000478776 TMEM67Q5HYA8 995 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 SPOCD1Q6ZMY3 1216 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 ARMCX6Q7L4S7 300 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 RETREG2Q8NC44 543 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
VLDLR-204ENST00000478776 LIN37Q96GY3 246 aaPredicted RBP6.32□□□□□ -1.4
VLDLR-204ENST00000478776 KIRREL1Q96J84 757 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
VLDLR-204ENST00000478776 CACNA2D2Q9NY47 1150 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 PPM1HQ9ULR3 514 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 CYP8B1Q9UNU6 501 aa6.32□□□□□ -1.4
VLDLR-204ENST00000478776 FBXO24O75426 580 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 LRIG2O94898 1065 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 EOMESO95936 686 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 MAPK8P45983 427 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 CDKAL1Q5VV42 579 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 SCARA3Q6AZY7 606 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 C3orf58Q8NDZ4 430 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 CCDC120Q96HB5 630 aa6.31□□□□□ -1.4
VLDLR-204ENST00000478776 PRAMEF27A3QJZ7 478 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 ENC1O14682 589 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 GIPC1O14908 333 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 TREHO43280 583 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 PAGE1O75459 146 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 GLI1P08151 1106 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 NTF4P34130 210 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 RING1Q06587 406 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 DSC3Q14574 896 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 SFRP5Q5T4F7 317 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 SYDE1Q6ZW31 735 aaPredicted RBP6.3□□□□□ -1.4
VLDLR-204ENST00000478776 HDXQ7Z353 690 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 UBE3DQ7Z6J8 389 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 ANKLE2Q86XL3 938 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 FBF1Q8TES7 1133 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 HSPA12BQ96MM6 686 aa6.3□□□□□ -1.4
VLDLR-204ENST00000478776 MFSD4AQ8N468 514 aa6.29□□□□□ -1.4
VLDLR-204ENST00000478776 MIPEPQ99797 713 aa6.29□□□□□ -1.4
VLDLR-204ENST00000478776 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
VLDLR-204ENST00000478776 H3BS24 57 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 NFIBO00712 420 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 TSPAN15O95858 294 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 GDNFP39905 211 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 ETF1P62495 437 aaKnown RBP6.28□□□□□ -1.4
VLDLR-204ENST00000478776 ATP2B2Q01814 1243 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 PCNX4Q63HM2 1172 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 ALG1LQ6GMV1 187 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 ZNF746Q6NUN9 644 aaPredicted RBP6.28□□□□□ -1.4
VLDLR-204ENST00000478776 PRR23BQ6ZRT6 265 aa6.28□□□□□ -1.4
VLDLR-204ENST00000478776 ZSCAN29Q8IWY8 852 aaPredicted RBP6.28□□□□□ -1.4
VLDLR-204ENST00000478776 SLITRK5O94991 958 aa6.27□□□□□ -1.41
VLDLR-204ENST00000478776 LMNB1P20700 586 aa6.27□□□□□ -1.41
VLDLR-204ENST00000478776 CYP7A1P22680 504 aa6.27□□□□□ -1.41
VLDLR-204ENST00000478776 FGD1P98174 961 aa6.27□□□□□ -1.41
VLDLR-204ENST00000478776 MFSD2AQ8NA29 543 aa6.27□□□□□ -1.41
VLDLR-204ENST00000478776 SEMA3GQ9NS98 782 aa6.27□□□□□ -1.41
VLDLR-204ENST00000478776 SPG7Q9UQ90 795 aa6.27□□□□□ -1.41
VLDLR-204ENST00000478776 PRR33A8MZF0 331 aa6.26□□□□□ -1.41
VLDLR-204ENST00000478776 CBX7O95931 251 aa6.26□□□□□ -1.41
VLDLR-204ENST00000478776 RAC2P15153 192 aa6.26□□□□□ -1.41
VLDLR-204ENST00000478776 CFPP27918 469 aa6.26□□□□□ -1.41
VLDLR-204ENST00000478776 INPP5AQ14642 412 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms