RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 NKD1Q969G9 470 aa8.87□□□□□ -0.99
CDK13-204ENST00000478563 CEP44Q9C0F1 390 aa8.87□□□□□ -0.99
CDK13-204ENST00000478563 STOML1Q9UBI4 398 aa8.87□□□□□ -0.99
CDK13-204ENST00000478563 METTL12A8MUP2 240 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 SMAD7O15105 426 aaKnown RBP8.86□□□□□ -0.99
CDK13-204ENST00000478563 ESRRAP11474 423 aaPredicted RBP8.86□□□□□ -0.99
CDK13-204ENST00000478563 CRKP46108 304 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 GRIA4P48058 902 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 PREPP48147 710 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 LMNB2Q03252 620 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 IKBKEQ14164 716 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 RASA3Q14644 834 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 UTP4Q969X6 686 aaKnown RBP8.86□□□□□ -0.99
CDK13-204ENST00000478563 NRSN2Q9GZP1 204 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 RNF208Q9H0X6 261 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 SOX17Q9H6I2 414 aaPredicted RBP8.86□□□□□ -0.99
CDK13-204ENST00000478563 C7orf69Q9H7B7 122 aa8.86□□□□□ -0.99
CDK13-204ENST00000478563 TLR3O15455 904 aaKnown RBP8.85□□□□□ -0.99
CDK13-204ENST00000478563 DLGAP3O95886 979 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 TGFB1P01137 390 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 TFE3P19532 575 aaPredicted RBP8.85□□□□□ -0.99
CDK13-204ENST00000478563 SPRED3Q2MJR0 410 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 SEZ6Q53EL9 994 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 ANKRD34AQ69YU3 496 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 TTBK2Q6IQ55 1244 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 FAM20CQ8IXL6 584 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 RUSC1Q9BVN2 902 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 TMPRSS13Q9BYE2 586 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 PPT2Q9UMR5 302 aa8.85□□□□□ -0.99
CDK13-204ENST00000478563 LOC100289279A0A1B0GTE1 492 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 ENC1O14682 589 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 MARCH6O60337 910 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 AGMOQ6ZNB7 445 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 ZDHHC13Q8IUH4 622 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 SLITRK4Q8IW52 837 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 TRIM42Q8IWZ5 723 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 ASAP3Q8TDY4 903 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 MICAL1Q8TDZ2 1067 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 SHDQ96IW2 340 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 ZFYVE1Q9HBF4 777 aa8.84□□□□□ -0.99
CDK13-204ENST00000478563 HMX2A2RU54 273 aa8.83□□□□□ -1
CDK13-204ENST00000478563 GSC2O15499 205 aa8.83□□□□□ -1
CDK13-204ENST00000478563 ARL4DP49703 201 aa8.83□□□□□ -1
CDK13-204ENST00000478563 CHMP4BP1P59074 171 aa8.83□□□□□ -1
CDK13-204ENST00000478563 ANAPC15P60006 121 aa8.83□□□□□ -1
CDK13-204ENST00000478563 JAG1P78504 1218 aa8.83□□□□□ -1
CDK13-204ENST00000478563 FILIP1Q7Z7B0 1213 aa8.83□□□□□ -1
CDK13-204ENST00000478563 CLEC10AQ8IUN9 316 aa8.83□□□□□ -1
CDK13-204ENST00000478563 ZCRB1Q8TBF4 217 aaKnown RBP8.83□□□□□ -1
CDK13-204ENST00000478563 NECAB3Q96P71 396 aaPredicted RBP8.83□□□□□ -1
CDK13-204ENST00000478563 PAGE1O75459 146 aa8.82□□□□□ -1
CDK13-204ENST00000478563 TIAF1O95411 115 aa8.82□□□□□ -1
CDK13-204ENST00000478563 ITPKAP23677 461 aa8.82□□□□□ -1
CDK13-204ENST00000478563 NFIAQ12857 509 aa8.82□□□□□ -1
CDK13-204ENST00000478563 RNF43Q68DV7 783 aa8.82□□□□□ -1
CDK13-204ENST00000478563 BNC2Q6ZN30 1099 aaPredicted RBP8.82□□□□□ -1
CDK13-204ENST00000478563 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
CDK13-204ENST00000478563 FAM169BQ8N8A8 192 aa8.82□□□□□ -1
CDK13-204ENST00000478563 FBXO27Q8NI29 283 aa8.82□□□□□ -1
CDK13-204ENST00000478563 FAM83CQ9BQN1 747 aa8.82□□□□□ -1
CDK13-204ENST00000478563 SUGCTQ9HAC7 445 aa8.82□□□□□ -1
CDK13-204ENST00000478563 IFT57Q9NWB7 429 aa8.82□□□□□ -1
CDK13-204ENST00000478563 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
CDK13-204ENST00000478563 COL4A3BPQ9Y5P4 624 aa8.82□□□□□ -1
CDK13-204ENST00000478563 A0A096LPE4 126 aa8.81□□□□□ -1
CDK13-204ENST00000478563 A0A1W2PPZ6 126 aa8.81□□□□□ -1
CDK13-204ENST00000478563 F13A1P00488 732 aa8.81□□□□□ -1
CDK13-204ENST00000478563 BMP3P12645 472 aa8.81□□□□□ -1
CDK13-204ENST00000478563 EIF6P56537 245 aaKnown RBP8.81□□□□□ -1
CDK13-204ENST00000478563 ZNF423Q2M1K9 1284 aa8.81□□□□□ -1
CDK13-204ENST00000478563 PLEKHG4Q58EX7 1191 aa8.81□□□□□ -1
CDK13-204ENST00000478563 TNNI3KQ59H18 835 aa8.81□□□□□ -1
CDK13-204ENST00000478563 FBXW10Q5XX13 1052 aa8.81□□□□□ -1
CDK13-204ENST00000478563 LRP10Q7Z4F1 713 aa8.81□□□□□ -1
CDK13-204ENST00000478563 CELF2-AS1Q8N7Q2 184 aa8.81□□□□□ -1
CDK13-204ENST00000478563 SH3TC2Q8TF17 1288 aa8.81□□□□□ -1
CDK13-204ENST00000478563 KANSL2Q9H9L4 492 aa8.81□□□□□ -1
CDK13-204ENST00000478563 ST7Q9NRC1 585 aa8.81□□□□□ -1
CDK13-204ENST00000478563 GPN3Q9UHW5 284 aaPredicted RBP8.81□□□□□ -1
CDK13-204ENST00000478563 PRR19A6NJB7 356 aa8.8□□□□□ -1
CDK13-204ENST00000478563 MCM4P33991 863 aa8.8□□□□□ -1
CDK13-204ENST00000478563 SMG8Q8ND04 991 aaKnown RBP8.8□□□□□ -1
CDK13-204ENST00000478563 DNAJC7Q99615 494 aa8.8□□□□□ -1
CDK13-204ENST00000478563 BRINP2Q9C0B6 783 aa8.8□□□□□ -1
CDK13-204ENST00000478563 FANCLQ9NW38 375 aa8.8□□□□□ -1
CDK13-204ENST00000478563 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
CDK13-204ENST00000478563 DNAJC6O75061 913 aa8.79□□□□□ -1
CDK13-204ENST00000478563 CDC45O75419 566 aa8.79□□□□□ -1
CDK13-204ENST00000478563 SPINK2P20155 84 aa8.79□□□□□ -1
CDK13-204ENST00000478563 LMNB1P20700 586 aa8.79□□□□□ -1
CDK13-204ENST00000478563 ZNF157P51786 506 aaPredicted RBP8.79□□□□□ -1
CDK13-204ENST00000478563 RPS26P62854 115 aaKnown RBP8.79□□□□□ -1
CDK13-204ENST00000478563 FAAP100Q0VG06 881 aa8.79□□□□□ -1
CDK13-204ENST00000478563 LILRB2Q8N423 598 aa8.79□□□□□ -1
CDK13-204ENST00000478563 JARID2Q92833 1246 aaPredicted RBP8.79□□□□□ -1
CDK13-204ENST00000478563 FERD3LQ96RJ6 166 aa8.79□□□□□ -1
CDK13-204ENST00000478563 CRBNQ96SW2 442 aa8.79□□□□□ -1
CDK13-204ENST00000478563 DBNDD2Q9BQY9 259 aa8.79□□□□□ -1
CDK13-204ENST00000478563 CCDC113Q9H0I3 377 aa8.79□□□□□ -1
CDK13-204ENST00000478563 PCDHB5Q9Y5E4 795 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms