RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 AEBP2Q6ZN18 517 aaPredicted RBP32.83■■■□□ 2.85
CDK13-204ENST00000478563 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
CDK13-204ENST00000478563 SENP3Q9H4L4 574 aaPredicted RBP27.97■■■□□ 2.07
CDK13-204ENST00000478563 PHF23Q9BUL5 403 aaPredicted RBP27.59■■■□□ 2.01
CDK13-204ENST00000478563 FOXD1Q16676 465 aa26.23■■□□□ 1.79
CDK13-204ENST00000478563 POTEDQ86YR6 584 aa25.19■■□□□ 1.62
CDK13-204ENST00000478563 MSH5O43196 834 aa24.67■■□□□ 1.54
CDK13-204ENST00000478563 PIAS4Q8N2W9 510 aaPredicted RBP24.32■■□□□ 1.48
CDK13-204ENST00000478563 PPP6R1Q9UPN7 881 aa24.12■■□□□ 1.45
CDK13-204ENST00000478563 PLPPR3Q6T4P5 718 aa24.06■■□□□ 1.44
CDK13-204ENST00000478563 ADRA2BP18089 450 aa23.98■■□□□ 1.43
CDK13-204ENST00000478563 MAPK8IP2Q13387 824 aaPredicted RBP22.24■■□□□ 1.15
CDK13-204ENST00000478563 DMRT2Q9Y5R5 561 aa22.12■■□□□ 1.13
CDK13-204ENST00000478563 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
CDK13-204ENST00000478563 CACNB1Q02641 598 aaPredicted RBP21.58■■□□□ 1.05
CDK13-204ENST00000478563 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
CDK13-204ENST00000478563 HOXD11P31277 338 aaPredicted RBP21.07■□□□□ 0.96
CDK13-204ENST00000478563 PPP4R3CPQ6ZMV5 832 aa21.06■□□□□ 0.96
CDK13-204ENST00000478563 RNF39Q9H2S5 420 aa21.06■□□□□ 0.96
CDK13-204ENST00000478563 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
CDK13-204ENST00000478563 RNF216Q9NWF9 866 aaPredicted RBP20.73■□□□□ 0.91
CDK13-204ENST00000478563 C1QBPQ07021 282 aaKnown RBP20.67■□□□□ 0.9
CDK13-204ENST00000478563 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
CDK13-204ENST00000478563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.83e-9■■□□□ 11.8
CDK13-204ENST00000478563 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
CDK13-204ENST00000478563 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
CDK13-204ENST00000478563 U3KPZ7 1027 aaPredicted RBP19.62■□□□□ 0.73
CDK13-204ENST00000478563 POTEHQ6S545 545 aa19.6■□□□□ 0.73
CDK13-204ENST00000478563 KCNA4P22459 653 aa19.57■□□□□ 0.72
CDK13-204ENST00000478563 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
CDK13-204ENST00000478563 DSG3P32926 999 aa19.53■□□□□ 0.72
CDK13-204ENST00000478563 CAPN15O75808 1086 aa19.47■□□□□ 0.71
CDK13-204ENST00000478563 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
CDK13-204ENST00000478563 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
CDK13-204ENST00000478563 ABCB7O75027 752 aa19.02■□□□□ 0.64
CDK13-204ENST00000478563 ZNF219Q9P2Y4 722 aaPredicted RBP18.9■□□□□ 0.62
CDK13-204ENST00000478563 APLP2Q06481 763 aa18.85■□□□□ 0.61
CDK13-204ENST00000478563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
CDK13-204ENST00000478563 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
CDK13-204ENST00000478563 SAMD1Q6SPF0 538 aaPredicted RBP18.63■□□□□ 0.57
CDK13-204ENST00000478563 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
CDK13-204ENST00000478563 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
CDK13-204ENST00000478563 CHRDL2Q6WN34 429 aa18.46■□□□□ 0.55
CDK13-204ENST00000478563 POLA2Q14181 598 aa18.4■□□□□ 0.54
CDK13-204ENST00000478563 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
CDK13-204ENST00000478563 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
CDK13-204ENST00000478563 SP7Q8TDD2 431 aaPredicted RBP18.08■□□□□ 0.48
CDK13-204ENST00000478563 ZBTB22O15209 634 aa18.07■□□□□ 0.48
CDK13-204ENST00000478563 AKT1S1Q96B36 256 aa18.04■□□□□ 0.48
CDK13-204ENST00000478563 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
CDK13-204ENST00000478563 REM2Q8IYK8 340 aaPredicted RBP17.92■□□□□ 0.46
CDK13-204ENST00000478563 PIP4P2Q8N4L2 257 aa17.92■□□□□ 0.46
CDK13-204ENST00000478563 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
CDK13-204ENST00000478563 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
CDK13-204ENST00000478563 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
CDK13-204ENST00000478563 HAX1O00165 279 aa17.73■□□□□ 0.43
CDK13-204ENST00000478563 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
CDK13-204ENST00000478563 EVX2Q03828 476 aa17.57■□□□□ 0.4
CDK13-204ENST00000478563 ATXN8OSP0DMR3 200 aa17.53■□□□□ 0.4
CDK13-204ENST00000478563 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
CDK13-204ENST00000478563 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
CDK13-204ENST00000478563 SPDYE2BA6NHP3 402 aa17.32■□□□□ 0.36
CDK13-204ENST00000478563 SPDYE6P0CI01 402 aa17.32■□□□□ 0.36
CDK13-204ENST00000478563 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
CDK13-204ENST00000478563 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
CDK13-204ENST00000478563 FBLN2P98095 1184 aa17.21■□□□□ 0.35
CDK13-204ENST00000478563 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
CDK13-204ENST00000478563 C19orf67A6NJJ6 358 aa17.16■□□□□ 0.34
CDK13-204ENST00000478563 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
CDK13-204ENST00000478563 MKRN4PQ13434 485 aaPredicted RBP17.13■□□□□ 0.33
CDK13-204ENST00000478563 GABBR2O75899 941 aa17.06■□□□□ 0.32
CDK13-204ENST00000478563 SSUH2Q9Y2M2 353 aa17.06■□□□□ 0.32
CDK13-204ENST00000478563 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
CDK13-204ENST00000478563 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
CDK13-204ENST00000478563 LHX8Q68G74 356 aa16.96■□□□□ 0.31
CDK13-204ENST00000478563 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
CDK13-204ENST00000478563 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDK13-204ENST00000478563 POTEIP0CG38 1075 aa16.75■□□□□ 0.27
CDK13-204ENST00000478563 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
CDK13-204ENST00000478563 FARP1Q9Y4F1 1045 aaPredicted RBP16.63■□□□□ 0.25
CDK13-204ENST00000478563 CLCN6P51797 869 aa16.45■□□□□ 0.22
CDK13-204ENST00000478563 DCBLD2Q96PD2 775 aa16.42■□□□□ 0.22
CDK13-204ENST00000478563 ZNF579Q8NAF0 562 aaKnown RBP16.37■□□□□ 0.21
CDK13-204ENST00000478563 PLSCR2Q9NRY7 297 aa16.37■□□□□ 0.21
CDK13-204ENST00000478563 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
CDK13-204ENST00000478563 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
CDK13-204ENST00000478563 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.2
CDK13-204ENST00000478563 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
CDK13-204ENST00000478563 OTUD5Q96G74 571 aa16.21■□□□□ 0.19
CDK13-204ENST00000478563 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
CDK13-204ENST00000478563 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
CDK13-204ENST00000478563 PHF12Q96QT6 1004 aa16.11■□□□□ 0.17
CDK13-204ENST00000478563 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
CDK13-204ENST00000478563 PROM2Q8N271 834 aa16.02■□□□□ 0.16
CDK13-204ENST00000478563 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
CDK13-204ENST00000478563 POTEMA6NI47 508 aa15.99■□□□□ 0.15
CDK13-204ENST00000478563 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
CDK13-204ENST00000478563 POTEGQ6S5H5 508 aa15.94■□□□□ 0.14
CDK13-204ENST00000478563 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDK13-204ENST00000478563 POTEJP0CG39 1038 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms