RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 NLGN1Q8N2Q7 840 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FAM217BQ9NTX9 383 aaPredicted RBP14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TACC3Q9Y6A5 838 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 USP17L12C9JPN9 530 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 USP17L21D6R901 530 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 KINO60870 393 aaKnown RBP14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 NR1I2O75469 434 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 U2AF2P26368 475 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CLCN1P35523 988 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CEBPZQ03701 1054 aaKnown RBP14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CATIPQ7Z7H3 387 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TXNRD3Q86VQ6 643 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FAM200AQ8TCP9 573 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TBC1D22AQ8WUA7 517 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 MRPS27Q92552 414 aaKnown RBP14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 RNF26Q9BY78 433 aaPredicted RBP14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 INCENPQ9NQS7 918 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CCDC39Q9UFE4 941 aa14.46□□□□□ -0.09
TRAF3IP3-213ENST00000478359 POLRMTO00411 1230 aaKnown RBP14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 SPTLC2O15270 562 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 DDAH1O94760 285 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 IL1R1P14778 569 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PPP4CP60510 307 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 IFIT1BQ5T764 474 aaKnown RBP14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ANO1Q5XXA6 986 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ZSCAN30Q86W11 494 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RAB11FIP4Q86YS3 637 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PHKBQ93100 1093 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 SLC26A6Q9BXS9 759 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 SENP2Q9HC62 589 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 LRRC37AA6NMS7 1700 aa14.46□□□□□ -0.1
TRAF3IP3-213ENST00000478359 BAZ2AQ9UIF9 1905 aaKnown RBP14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ECM29Q5VYK3 1845 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RANBP6O60518 1105 aaKnown RBP14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PPP6R2O75170 966 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 POLR3DP05423 398 aaPredicted RBP14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PLCG2P16885 1265 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RXRAP19793 462 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 AKAP17AQ02040 695 aaKnown RBP14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 TYRO3Q06418 890 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 NKX2-3Q8TAU0 364 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ZKSCAN3Q9BRR0 538 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ZNF287Q9HBT7 754 aa14.45□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PPFIA3O75145 1194 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 UFL1O94874 794 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MSNP26038 577 aaKnown RBP14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 CAMK4Q16566 473 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 OTUD7BQ6GQQ9 843 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 CCDC144CPQ8IYA2 1237 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 CRACR2BQ8N4Y2 399 aaPredicted RBP14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 FOXP1Q9H334 677 aaPredicted RBP14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 CD209Q9NNX6 404 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PCDHA7Q9UN72 937 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 NRXN2Q9P2S2 1712 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 GPSM2P81274 684 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 SLC39A14Q15043 492 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 SP8Q8IXZ3 490 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ENAHQ8N8S7 591 aaPredicted RBP14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ENGASEQ8NFI3 743 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MYL10Q9BUA6 226 aa14.44□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ROBO3Q96MS0 1386 aa14.43□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MMP1P03956 469 aa14.43□□□□□ -0.1
TRAF3IP3-213ENST00000478359 USP5P45974 858 aa14.43□□□□□ -0.1
TRAF3IP3-213ENST00000478359 FSIP1Q8NA03 581 aa14.43□□□□□ -0.1
TRAF3IP3-213ENST00000478359 NUP133Q8WUM0 1156 aa14.43□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MROH7-TTC4A0A0A0MT08 1334 aa14.43□□□□□ -0.1
TRAF3IP3-213ENST00000478359 KIF28PB7ZC32 967 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 ALDH1B1P30837 517 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 DDR1Q08345 913 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RILPL1Q5EBL4 403 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 NBPF11Q86T75 865 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 NOSTRINQ8IVI9 506 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MAP3K14Q99558 947 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 FTOQ9C0B1 505 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 NOL7Q9UMY1 257 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 SUGT1Q9Y2Z0 365 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 CLIC4Q9Y696 253 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MRVI1Q9Y6F6 885 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MYH2Q9UKX2 1941 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RGPD3A6NKT7 1758 aaPredicted RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RGPD4Q7Z3J3 1758 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PRPF3O43395 683 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 CMA1P23946 247 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 C12orf60Q5U649 245 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PROM2Q8N271 834 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 TMX4Q9H1E5 349 aaPredicted RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MCM9Q9NXL9 1143 aa14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 RGS17Q9UGC6 210 aaPredicted RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 MKRN1Q9UHC7 482 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP3-213ENST00000478359 LTBP1Q14766 1721 aa14.41□□□□□ -0.1
TRAF3IP3-213ENST00000478359 TSPY2A6NKD2 308 aa14.41□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PPEF1O14829 653 aaPredicted RBP14.41□□□□□ -0.1
TRAF3IP3-213ENST00000478359 PDE6BP35913 854 aa14.41□□□□□ -0.1
TRAF3IP3-213ENST00000478359 TROAPQ12815 778 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms