RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
CDKN1B-204ENST00000477087 CAMSAP2Q08AD1 1489 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 RTEL1-TNFRSF6BF6WH68 1400 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 SYNGAP1Q96PV0 1343 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 MED26O95402 600 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 NFICP08651 508 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 GSTT1P30711 240 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 SULF2Q8IWU5 870 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 KCNB2Q92953 911 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 KRT82Q9NSB4 513 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 ARHGEF5Q12774 1597 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 MAPKBP1O60336 1514 aa8.39□□□□□ -1.07
CDKN1B-204ENST00000477087 ITSN2Q9NZM3 1697 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 ZAR1Q86SH2 424 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 EMILIN2Q9BXX0 1053 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 ATXN3LQ9H3M9 355 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 SEMA6CQ9H3T2 930 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 ACSS3Q9H6R3 686 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 PIDD1Q9HB75 910 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 SPG7Q9UQ90 795 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 DAGLAQ9Y4D2 1042 aa8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 ZCCHC11Q5TAX3 1644 aaKnown RBP8.38□□□□□ -1.07
CDKN1B-204ENST00000477087 GIPC1O14908 333 aa8.37□□□□□ -1.07
CDKN1B-204ENST00000477087 TMPRSS2O15393 492 aa8.37□□□□□ -1.07
CDKN1B-204ENST00000477087 HNRNPMP52272 730 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDKN1B-204ENST00000477087 ID3Q02535 119 aa8.37□□□□□ -1.07
CDKN1B-204ENST00000477087 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
CDKN1B-204ENST00000477087 PPP1R9AQ9ULJ8 1098 aa8.37□□□□□ -1.07
CDKN1B-204ENST00000477087 DNMT1P26358 1616 aaKnown RBP8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 ZNF862O60290 1169 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 SPINK2P20155 84 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 NME2P22392 152 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 SETDB2Q96T68 719 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 CBX8Q9HC52 389 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 RRP7BPQ9NSQ0 103 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 SAMM50Q9Y512 469 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 CCDC141Q6ZP82 1450 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 ABCA9Q8IUA7 1624 aa8.36□□□□□ -1.07
CDKN1B-204ENST00000477087 PDIA4P13667 645 aaKnown RBP8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 ARNTP27540 789 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 ADMP35318 185 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 CYP27A1Q02318 531 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 TPTE2Q6XPS3 522 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 DTX1Q86Y01 620 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 CEP44Q9C0F1 390 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 CRIM1Q9NZV1 1036 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 WWC3Q9ULE0 1092 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 C9orf84Q5VXU9 1444 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 CD109Q6YHK3 1445 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 GLI2P10070 1586 aa8.35□□□□□ -1.07
CDKN1B-204ENST00000477087 NEO1Q92859 1461 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 PREX2Q70Z35 1606 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 CYP26A1O43174 497 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 FOSL1P15407 271 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 MAP1SQ66K74 1059 aaPredicted RBP8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 PDZD3Q86UT5 571 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 SHISA5Q8N114 240 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 FANCD2OSQ96PS1 177 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 MPHOSPH9Q99550 1183 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 LGR6Q9HBX8 967 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 ANKRD50Q9ULJ7 1429 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 MAST1Q9Y2H9 1570 aa8.34□□□□□ -1.07
CDKN1B-204ENST00000477087 ARHGAP5Q13017 1502 aa8.34□□□□□ -1.08
CDKN1B-204ENST00000477087 FAM170BA6NMN3 283 aa8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 WNT11O96014 354 aa8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 GP2P55259 537 aaKnown RBP8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 CDC42BPAQ5VT25 1732 aa8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 NECAB3Q96P71 396 aaPredicted RBP8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 OSBPL7Q9BZF2 842 aa8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
CDKN1B-204ENST00000477087 FANCAO15360 1455 aa8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 STK35Q8TDR2 534 aa8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 FRMD6Q96NE9 622 aa8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 FAM8A1Q9UBU6 413 aa8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 ANGEL1Q9UNK9 670 aaKnown RBP8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 RIMBP3CA6NJZ7 1639 aa8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 RIMBP3BA6NNM3 1639 aa8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 RIMBP3Q9UFD9 1639 aa8.32□□□□□ -1.08
CDKN1B-204ENST00000477087 SPAG9O60271 1321 aaKnown RBP8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 TTC37Q6PGP7 1564 aa8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 SAMD9LQ8IVG5 1584 aa8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 ARHGEF12Q9NZN5 1544 aa8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 FGD1P98174 961 aa8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 TTLL4Q14679 1199 aa8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 SMYD4Q8IYR2 804 aaPredicted RBP8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 GATA6Q92908 595 aa8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 LRRC4CQ9HCJ2 640 aa8.31□□□□□ -1.08
CDKN1B-204ENST00000477087 KIF15Q9NS87 1388 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms