RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
CDKN1B-204ENST00000477087 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
CDKN1B-204ENST00000477087 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
CDKN1B-204ENST00000477087 PHF23Q9BUL5 403 aaPredicted RBP24.03■■□□□ 1.44
CDKN1B-204ENST00000477087 FOXD1Q16676 465 aa22.44■■□□□ 1.18
CDKN1B-204ENST00000477087 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
CDKN1B-204ENST00000477087 ADRA2BP18089 450 aa21.3■■□□□ 1
CDKN1B-204ENST00000477087 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
CDKN1B-204ENST00000477087 PIAS4Q8N2W9 510 aaPredicted RBP21.15■□□□□ 0.98
CDKN1B-204ENST00000477087 MSH5O43196 834 aa20.91■□□□□ 0.94
CDKN1B-204ENST00000477087 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
CDKN1B-204ENST00000477087 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
CDKN1B-204ENST00000477087 PPP4R3CPQ6ZMV5 832 aa19.48■□□□□ 0.71
CDKN1B-204ENST00000477087 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
CDKN1B-204ENST00000477087 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
CDKN1B-204ENST00000477087 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
CDKN1B-204ENST00000477087 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
CDKN1B-204ENST00000477087 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
CDKN1B-204ENST00000477087 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
CDKN1B-204ENST00000477087 KCNA4P22459 653 aa18.61■□□□□ 0.57
CDKN1B-204ENST00000477087 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
CDKN1B-204ENST00000477087 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
CDKN1B-204ENST00000477087 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
CDKN1B-204ENST00000477087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.464e-7■□□□□ 10.4
CDKN1B-204ENST00000477087 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
CDKN1B-204ENST00000477087 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
CDKN1B-204ENST00000477087 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
CDKN1B-204ENST00000477087 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
CDKN1B-204ENST00000477087 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
CDKN1B-204ENST00000477087 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
CDKN1B-204ENST00000477087 FOXD4L1Q9NU39 408 aa17.28■□□□□ 0.36
CDKN1B-204ENST00000477087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
CDKN1B-204ENST00000477087 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
CDKN1B-204ENST00000477087 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
CDKN1B-204ENST00000477087 APLP2Q06481 763 aa17.2■□□□□ 0.34
CDKN1B-204ENST00000477087 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
CDKN1B-204ENST00000477087 CAPN15O75808 1086 aa17.13■□□□□ 0.33
CDKN1B-204ENST00000477087 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
CDKN1B-204ENST00000477087 ZBTB22O15209 634 aa17.07■□□□□ 0.32
CDKN1B-204ENST00000477087 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
CDKN1B-204ENST00000477087 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
CDKN1B-204ENST00000477087 DSG3P32926 999 aa16.85■□□□□ 0.29
CDKN1B-204ENST00000477087 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
CDKN1B-204ENST00000477087 ABCB7O75027 752 aa16.75■□□□□ 0.27
CDKN1B-204ENST00000477087 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
CDKN1B-204ENST00000477087 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
CDKN1B-204ENST00000477087 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
CDKN1B-204ENST00000477087 POLA2Q14181 598 aa16.57■□□□□ 0.24
CDKN1B-204ENST00000477087 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
CDKN1B-204ENST00000477087 FBLN2P98095 1184 aa16.15■□□□□ 0.18
CDKN1B-204ENST00000477087 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
CDKN1B-204ENST00000477087 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
CDKN1B-204ENST00000477087 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
CDKN1B-204ENST00000477087 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
CDKN1B-204ENST00000477087 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
CDKN1B-204ENST00000477087 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
CDKN1B-204ENST00000477087 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
CDKN1B-204ENST00000477087 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
CDKN1B-204ENST00000477087 REM2Q8IYK8 340 aaPredicted RBP15.66■□□□□ 0.1
CDKN1B-204ENST00000477087 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
CDKN1B-204ENST00000477087 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
CDKN1B-204ENST00000477087 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
CDKN1B-204ENST00000477087 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
CDKN1B-204ENST00000477087 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
CDKN1B-204ENST00000477087 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
CDKN1B-204ENST00000477087 POTEHQ6S545 545 aa15.45■□□□□ 0.06
CDKN1B-204ENST00000477087 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
CDKN1B-204ENST00000477087 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
CDKN1B-204ENST00000477087 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDKN1B-204ENST00000477087 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
CDKN1B-204ENST00000477087 FKBP8Q14318 412 aa15.22■□□□□ 0.03
CDKN1B-204ENST00000477087 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
CDKN1B-204ENST00000477087 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
CDKN1B-204ENST00000477087 PROM2Q8N271 834 aa15.13■□□□□ 0.01
CDKN1B-204ENST00000477087 CHADLQ6NUI6 762 aa15.03■□□□□ -0
CDKN1B-204ENST00000477087 HAX1O00165 279 aa14.92□□□□□ -0.02
CDKN1B-204ENST00000477087 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
CDKN1B-204ENST00000477087 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
CDKN1B-204ENST00000477087 PLEKHG5O94827 1062 aa14.81□□□□□ -0.04
CDKN1B-204ENST00000477087 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
CDKN1B-204ENST00000477087 MIER1Q8N108 512 aa14.77□□□□□ -0.05
CDKN1B-204ENST00000477087 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
CDKN1B-204ENST00000477087 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
CDKN1B-204ENST00000477087 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDKN1B-204ENST00000477087 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
CDKN1B-204ENST00000477087 CD44P16070 742 aaKnown RBP14.68□□□□□ -0.06
CDKN1B-204ENST00000477087 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
CDKN1B-204ENST00000477087 EVX2Q03828 476 aa14.66□□□□□ -0.06
CDKN1B-204ENST00000477087 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
CDKN1B-204ENST00000477087 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
CDKN1B-204ENST00000477087 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
CDKN1B-204ENST00000477087 ZRANB1Q9UGI0 708 aa14.56□□□□□ -0.08
CDKN1B-204ENST00000477087 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
CDKN1B-204ENST00000477087 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
CDKN1B-204ENST00000477087 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
CDKN1B-204ENST00000477087 GABBR2O75899 941 aa14.42□□□□□ -0.1
CDKN1B-204ENST00000477087 CLCN6P51797 869 aa14.42□□□□□ -0.1
CDKN1B-204ENST00000477087 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
CDKN1B-204ENST00000477087 NUBP1P53384 320 aa14.36□□□□□ -0.11
CDKN1B-204ENST00000477087 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 331.3 ms