RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
NUP188-205ENST00000477069 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.34□□□□□ -0.27
NUP188-205ENST00000477069 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 KINO60870 393 aaKnown RBP13.34□□□□□ -0.27
NUP188-205ENST00000477069 STK11IPQ8N1F8 1099 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 CRACR2BQ8N4Y2 399 aaPredicted RBP13.34□□□□□ -0.27
NUP188-205ENST00000477069 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
NUP188-205ENST00000477069 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 A0A1B0GVL5 298 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 ERICH2A1L162 156 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 OFD1O75665 1012 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 WDHD1O75717 1129 aaPredicted RBP13.33□□□□□ -0.27
NUP188-205ENST00000477069 HSPA1LP34931 641 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 IQCB1Q15051 598 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 PRR5LQ6MZQ0 368 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 C15orf52Q6ZUT6 534 aaKnown RBP13.33□□□□□ -0.27
NUP188-205ENST00000477069 CNBD1Q8NA66 436 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 FANCBQ8NB91 859 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 WASF1Q92558 559 aa13.33□□□□□ -0.27
NUP188-205ENST00000477069 IGSF3O75054 1194 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 PPP6R2O75170 966 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 SF3A1Q15459 793 aaKnown RBP13.33□□□□□ -0.28
NUP188-205ENST00000477069 CRY2Q49AN0 593 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
NUP188-205ENST00000477069 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
NUP188-205ENST00000477069 UBAC1Q9BSL1 405 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.28
NUP188-205ENST00000477069 LEMD3Q9Y2U8 911 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
NUP188-205ENST00000477069 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 MMP1P03956 469 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.28
NUP188-205ENST00000477069 CMA1P23946 247 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 ZNF165P49910 485 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 EVX2Q03828 476 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 STX1AQ16623 288 aa13.33□□□□□ -0.28
NUP188-205ENST00000477069 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
NUP188-205ENST00000477069 ANKRD31Q8N7Z5 1873 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 ORC4O43929 436 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 GYS1P13807 737 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 FUT2Q10981 343 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 SBK1Q52WX2 424 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 ATP8A2Q9NTI2 1148 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 NRXN2Q9P2S2 1712 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 DEXIO95424 95 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 TRIM29Q14134 588 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 PLA2G4DQ86XP0 818 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 SHISA4Q96DD7 197 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 HPSEQ9Y251 543 aa13.32□□□□□ -0.28
NUP188-205ENST00000477069 XDHP47989 1333 aa13.31□□□□□ -0.28
NUP188-205ENST00000477069 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
NUP188-205ENST00000477069 USP17L21D6R901 530 aa13.31□□□□□ -0.28
NUP188-205ENST00000477069 CHAF1AQ13111 956 aaPredicted RBP13.31□□□□□ -0.28
NUP188-205ENST00000477069 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
NUP188-205ENST00000477069 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.31□□□□□ -0.28
NUP188-205ENST00000477069 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
NUP188-205ENST00000477069 FOCADQ5VW36 1801 aa13.31□□□□□ -0.28
NUP188-205ENST00000477069 PFKFB1P16118 471 aa13.31□□□□□ -0.28
NUP188-205ENST00000477069 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
NUP188-205ENST00000477069 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
NUP188-205ENST00000477069 RNF26Q9BY78 433 aaPredicted RBP13.31□□□□□ -0.28
NUP188-205ENST00000477069 TOB1P50616 345 aaPredicted RBP13.3□□□□□ -0.28
NUP188-205ENST00000477069 SLC27A3Q5K4L6 730 aa13.3□□□□□ -0.28
NUP188-205ENST00000477069 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
NUP188-205ENST00000477069 FOXP1Q9H334 677 aaPredicted RBP13.3□□□□□ -0.28
NUP188-205ENST00000477069 ARPP21Q9UBL0 812 aaPredicted RBP13.3□□□□□ -0.28
NUP188-205ENST00000477069 TROAPQ12815 778 aa13.3□□□□□ -0.28
NUP188-205ENST00000477069 SPTY2D1Q68D10 685 aaPredicted RBP13.3□□□□□ -0.28
NUP188-205ENST00000477069 SHC4Q6S5L8 630 aa13.3□□□□□ -0.28
NUP188-205ENST00000477069 DHX40Q8IX18 779 aaKnown RBP13.3□□□□□ -0.28
NUP188-205ENST00000477069 BTBD18B2RXH4 712 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 PRDM1O75626 825 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 PKN1Q16512 942 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 TIGD1Q96MW7 591 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
NUP188-205ENST00000477069 KCNF1Q9H3M0 494 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 JAG2Q9Y219 1238 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 ROBO3Q96MS0 1386 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 ZNF202O95125 648 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
NUP188-205ENST00000477069 IFIT1BQ5T764 474 aaKnown RBP13.29□□□□□ -0.28
NUP188-205ENST00000477069 RESP18Q5W5W9 173 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 DIS3L2Q8IYB7 885 aaKnown RBP13.29□□□□□ -0.28
NUP188-205ENST00000477069 MPNDQ8N594 471 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 WDR66Q8TBY9 1149 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 ANO10Q9NW15 660 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 KIAA1468Q9P260 1216 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 KCNJ14Q9UNX9 436 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 NPHP1O15259 732 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 DDAH1O94760 285 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 CYP2D6P10635 497 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 ZNF75DP51815 510 aa13.29□□□□□ -0.28
NUP188-205ENST00000477069 GPSM2P81274 684 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms