RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 JPH3Q8WXH2 748 aaPredicted RBP6.86□□□□□ -1.31
SPTLC3-205ENST00000476791 PGBD4Q96DM1 585 aa6.86□□□□□ -1.31
SPTLC3-205ENST00000476791 TTC14Q96N46 770 aa6.86□□□□□ -1.31
SPTLC3-205ENST00000476791 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.86□□□□□ -1.31
SPTLC3-205ENST00000476791 KANSL2Q9H9L4 492 aa6.86□□□□□ -1.31
SPTLC3-205ENST00000476791 SLC30A1Q9Y6M5 507 aa6.86□□□□□ -1.31
SPTLC3-205ENST00000476791 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 ORC4O43929 436 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 ABL1P00519 1130 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 HSPA1AP0DMV8 641 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 HSPA1BP0DMV9 641 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 VAMP1P23763 118 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 CSE1LP55060 971 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 HNRNPH2P55795 449 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PRR20EP86478 221 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PRR20CP86479 221 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PRR20DP86480 221 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PRR20BP86481 221 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PRR20AP86496 221 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 DEUP1Q05D60 604 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 BRD3Q15059 726 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PTPRNQ16849 979 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PPP4R4Q6NUP7 873 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 CCDC80Q76M96 950 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 RSRC1Q96IZ7 334 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 FAM167BQ9BTA0 163 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 UPF2Q9HAU5 1272 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 LUZP4Q9P127 313 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 CCDC163A0A0D9SF12 145 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PRMT3O60678 531 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 KATNA1O75449 491 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 E2F6O75461 281 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 INPP5BP32019 993 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 GRIK3Q13003 919 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 GRM1Q13255 1194 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 TERF2Q15554 542 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 SLC10A5Q5PT55 438 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 KANK4Q5T7N3 995 aaPredicted RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 DZIP1Q86YF9 867 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PGBD3Q8N328 593 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 SUN5Q8TC36 379 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 BICD2Q8TD16 824 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 SLC16A10Q8TF71 515 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 MIEF2Q96C03 454 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 ALPK1Q96QP1 1244 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 OSBPL10Q9BXB5 764 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 TAOK3Q9H2K8 898 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 SNX5Q9Y5X3 404 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 RNF123Q5XPI4 1314 aa6.85□□□□□ -1.31
SPTLC3-205ENST00000476791 PRDM2Q13029 1718 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 ZNF189O75820 626 aaPredicted RBP6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 HSD3B2P26439 372 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 POLD2P49005 469 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 SCNN1DP51172 638 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 NUCB1Q02818 461 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 MRPL28Q13084 256 aaKnown RBP6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 DESI1Q6ICB0 168 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 FBXO33Q7Z6M2 555 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 TMCO5AQ8N6Q1 288 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 USP6NLQ92738 828 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 TNMDQ9H2S6 317 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 PSD3Q9NYI0 1048 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 MRFAP1Q9Y605 127 aa6.84□□□□□ -1.31
SPTLC3-205ENST00000476791 SNUPNO95149 360 aaKnown RBP6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 PAHP00439 452 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 EPB42P16452 691 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 SKIV2L2P42285 1042 aaKnown RBP6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 SERPINB4P48594 390 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 DMPKQ09013 629 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 MUM1Q2TAK8 710 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 SPDYCQ5MJ68 293 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 CPLX2Q6PUV4 134 aaKnown RBP6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 FERMT3Q86UX7 667 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 HOOK3Q86VS8 718 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 TEX19Q8NA77 164 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 ATP11CQ8NB49 1132 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 C7orf57Q8NEG2 295 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 E2F7Q96AV8 911 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 DNAI2Q9GZS0 605 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 EVA1BQ9NVM1 165 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 POLKQ9UBT6 870 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 TRAK1Q9UPV9 953 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 SSX2IPQ9Y2D8 614 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 DAAM1Q9Y4D1 1078 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 PIK3R4Q99570 1358 aa6.84□□□□□ -1.32
SPTLC3-205ENST00000476791 FAM187AA6NFU0 413 aa6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 TBKBP1A7MCY6 615 aa6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 FOXN3O00409 490 aaPredicted RBP6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 LCE2BO14633 110 aa6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 PER1O15534 1290 aaPredicted RBP6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 MYL3P08590 195 aa6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 KCNA6P17658 529 aa6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 CHMLP26374 656 aa6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 CTHP32929 405 aa6.83□□□□□ -1.32
SPTLC3-205ENST00000476791 STT3AP46977 705 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms