RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.95■■■■□ 3.03
VEGFA-211ENST00000476772 RANBP6O60518 1105 aaKnown RBP33.94■■■■□ 3.02
VEGFA-211ENST00000476772 TMEM67Q5HYA8 995 aa33.94■■■■□ 3.02
VEGFA-211ENST00000476772 GTF3C6Q969F1 213 aa33.94■■■■□ 3.02
VEGFA-211ENST00000476772 ZKSCAN3Q9BRR0 538 aa33.94■■■■□ 3.02
VEGFA-211ENST00000476772 FZD9O00144 591 aa33.93■■■■□ 3.02
VEGFA-211ENST00000476772 IFIT3O14879 490 aaKnown RBP33.93■■■■□ 3.02
VEGFA-211ENST00000476772 CACNB3P54284 484 aa33.93■■■■□ 3.02
VEGFA-211ENST00000476772 ZNF274Q96GC6 653 aaPredicted RBP33.93■■■■□ 3.02
VEGFA-211ENST00000476772 PRMT6Q96LA8 375 aaPredicted RBP33.93■■■■□ 3.02
VEGFA-211ENST00000476772 OSBPL5Q9H0X9 879 aaPredicted RBP33.93■■■■□ 3.02
VEGFA-211ENST00000476772 BRPF3Q9ULD4 1205 aa33.93■■■■□ 3.02
VEGFA-211ENST00000476772 NAP1L2Q9ULW6 460 aaPredicted RBP33.93■■■■□ 3.02
VEGFA-211ENST00000476772 PFKFB2O60825 505 aa33.93■■■■□ 3.02
VEGFA-211ENST00000476772 LY9Q9HBG7 655 aa33.93■■■■□ 3.02
VEGFA-211ENST00000476772 KLF18A0A0U1RQI7 1052 aa33.92■■■■□ 3.02
VEGFA-211ENST00000476772 PDIA3P30101 505 aaKnown RBP33.92■■■■□ 3.02
VEGFA-211ENST00000476772 TDRD3Q9H7E2 651 aaKnown RBP33.92■■■■□ 3.02
VEGFA-211ENST00000476772 SENP2Q9HC62 589 aa33.92■■■■□ 3.02
VEGFA-211ENST00000476772 EIF6P56537 245 aaKnown RBP33.91■■■■□ 3.02
VEGFA-211ENST00000476772 SCRN1Q12765 414 aa33.91■■■■□ 3.02
VEGFA-211ENST00000476772 MTA3Q9BTC8 594 aa33.91■■■■□ 3.02
VEGFA-211ENST00000476772 IDI2Q9BXS1 227 aa33.91■■■■□ 3.02
VEGFA-211ENST00000476772 SPDYE2BA6NHP3 402 aa33.9■■■■□ 3.02
VEGFA-211ENST00000476772 SPDYE6P0CI01 402 aa33.9■■■■□ 3.02
VEGFA-211ENST00000476772 SART3Q15020 963 aaKnown RBP33.9■■■■□ 3.02
VEGFA-211ENST00000476772 SLC44A5Q8NCS7 719 aa33.9■■■■□ 3.02
VEGFA-211ENST00000476772 DLGAP5Q15398 846 aa33.9■■■■□ 3.02
VEGFA-211ENST00000476772 UBAC1Q9BSL1 405 aa33.9■■■■□ 3.02
VEGFA-211ENST00000476772 SMC3Q9UQE7 1217 aa33.9■■■■□ 3.02
VEGFA-211ENST00000476772 DICER1Q9UPY3 1922 aaKnown RBP33.9■■■■□ 3.02
VEGFA-211ENST00000476772 DTNBO60941 627 aa33.89■■■■□ 3.02
VEGFA-211ENST00000476772 LIFRP42702 1097 aa33.89■■■■□ 3.02
VEGFA-211ENST00000476772 C16orf86Q6ZW13 317 aa33.89■■■■□ 3.02
VEGFA-211ENST00000476772 FAM198AQ9UFP1 575 aa33.89■■■■□ 3.02
VEGFA-211ENST00000476772 YBX3P16989 372 aaKnown RBP eCLIP33.88■■■■□ 3.01
VEGFA-211ENST00000476772 LMNB1P20700 586 aa33.88■■■■□ 3.01
VEGFA-211ENST00000476772 CCT2P78371 535 aaKnown RBP33.88■■■■□ 3.01
VEGFA-211ENST00000476772 FAM47AQ5JRC9 791 aa33.88■■■■□ 3.01
VEGFA-211ENST00000476772 TTC6Q86TZ1 520 aa33.88■■■■□ 3.01
VEGFA-211ENST00000476772 SGMS1Q86VZ5 419 aa33.88■■■■□ 3.01
VEGFA-211ENST00000476772 MKNK2Q9HBH9 465 aa33.88■■■■□ 3.01
VEGFA-211ENST00000476772 SBF1O95248 1867 aa33.88■■■■□ 3.01
VEGFA-211ENST00000476772 ERICH2A1L162 156 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 GOLGA8BA8MQT2 603 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 WTAPQ15007 396 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 ZFPM1Q8IX07 1006 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 TNKSO95271 1327 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 ZNF541Q9H0D2 1346 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 RPS12P25398 132 aaKnown RBP33.87■■■■□ 3.01
VEGFA-211ENST00000476772 TCP10Q12799 353 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 NFXL1Q6ZNB6 911 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 ZSCAN10Q96SZ4 725 aaPredicted RBP33.87■■■■□ 3.01
VEGFA-211ENST00000476772 HPS5Q9UPZ3 1129 aa33.87■■■■□ 3.01
VEGFA-211ENST00000476772 SHTN1A0MZ66 631 aa33.86■■■■□ 3.01
VEGFA-211ENST00000476772 NPM3O75607 178 aaKnown RBP33.86■■■■□ 3.01
VEGFA-211ENST00000476772 CDK8P49336 464 aa33.86■■■■□ 3.01
VEGFA-211ENST00000476772 IQCA1Q86XH1 822 aa33.86■■■■□ 3.01
VEGFA-211ENST00000476772 RAB11FIP4Q86YS3 637 aa33.86■■■■□ 3.01
VEGFA-211ENST00000476772 MTMR14Q8NCE2 650 aa33.86■■■■□ 3.01
VEGFA-211ENST00000476772 GJA3Q9Y6H8 435 aa33.86■■■■□ 3.01
VEGFA-211ENST00000476772 TSPY2A6NKD2 308 aa33.85■■■■□ 3.01
VEGFA-211ENST00000476772 SEC23AQ15436 765 aa33.85■■■■□ 3.01
VEGFA-211ENST00000476772 APOA5Q6Q788 366 aa33.85■■■■□ 3.01
VEGFA-211ENST00000476772 ZNF287Q9HBT7 754 aa33.85■■■■□ 3.01
VEGFA-211ENST00000476772 NCOA5Q9HCD5 579 aaKnown RBP33.85■■■■□ 3.01
VEGFA-211ENST00000476772 GJB2P29033 226 aa33.84■■■■□ 3.01
VEGFA-211ENST00000476772 NT5C2P49902 561 aa33.84■■■■□ 3.01
VEGFA-211ENST00000476772 CCDC69A6NI79 296 aa33.84■■■■□ 3.01
VEGFA-211ENST00000476772 RASA1P20936 1047 aa33.84■■■■□ 3.01
VEGFA-211ENST00000476772 GMPSP49915 693 aaPredicted RBP33.84■■■■□ 3.01
VEGFA-211ENST00000476772 PKP1Q13835 747 aa33.84■■■■□ 3.01
VEGFA-211ENST00000476772 ENAHQ8N8S7 591 aaPredicted RBP33.84■■■■□ 3.01
VEGFA-211ENST00000476772 CLRN2A0PK11 232 aa33.83■■■■□ 3.01
VEGFA-211ENST00000476772 TFAP4Q01664 338 aa33.83■■■■□ 3.01
VEGFA-211ENST00000476772 GABPAQ06546 454 aa33.83■■■■□ 3.01
VEGFA-211ENST00000476772 ZNF444Q8N0Y2 327 aaPredicted RBP33.83■■■■□ 3.01
VEGFA-211ENST00000476772 TMOD2Q9NZR1 351 aa33.83■■■■□ 3.01
VEGFA-211ENST00000476772 HLA-DOAP06340 250 aa33.82■■■■□ 3
VEGFA-211ENST00000476772 RAB3GAP1Q15042 981 aa33.82■■■■□ 3
VEGFA-211ENST00000476772 ZBED3Q96IU2 234 aaPredicted RBP33.82■■■■□ 3
VEGFA-211ENST00000476772 MYOZ2Q9NPC6 264 aa33.82■■■■□ 3
VEGFA-211ENST00000476772 ZNF70Q9UC06 446 aaPredicted RBP33.82■■■■□ 3
VEGFA-211ENST00000476772 SIPA1L1O43166 1804 aa33.82■■■■□ 3
VEGFA-211ENST00000476772 NMT2O60551 498 aa33.81■■■■□ 3
VEGFA-211ENST00000476772 ZNF280AP59817 542 aaPredicted RBP33.81■■■■□ 3
VEGFA-211ENST00000476772 NUCB2P80303 420 aa33.81■■■■□ 3
VEGFA-211ENST00000476772 TMTC2Q8N394 836 aa33.81■■■■□ 3
VEGFA-211ENST00000476772 SLC12A7Q9Y666 1083 aa33.81■■■■□ 3
VEGFA-211ENST00000476772 ENTPD3O75355 529 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 SPDYE2Q495Y8 402 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 SH3BP5LQ7L8J4 393 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 DPF2Q92785 391 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 MYL10Q9BUA6 226 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 DHX36Q9H2U1 1008 aaKnown RBP33.8■■■■□ 3
VEGFA-211ENST00000476772 SERPINB13Q9UIV8 391 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 DDTLA6NHG4 134 aaPredicted RBP33.8■■■■□ 3
VEGFA-211ENST00000476772 ZBTB43O43298 467 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 JAK2O60674 1132 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 CTDNEP1O95476 244 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms