RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 USP17L21D6R901 530 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 CTR9Q6PD62 1173 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 CLIC6Q96NY7 704 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 PDCL3Q9H2J4 239 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 MROH7-TTC4A0A0A0MT08 1334 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 PFKFB1P16118 471 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 RFC4P35249 363 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 PTPAQ15257 358 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 SEC23AQ15436 765 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 PLA2G4DQ86XP0 818 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 ESR2Q92731 530 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 ANAPC4Q9UJX5 808 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 ZNF75DP51815 510 aa19.25■□□□□ 0.67
TVP23B-202ENST00000476139 CRACR2BQ8N4Y2 399 aaPredicted RBP19.25■□□□□ 0.67
TVP23B-202ENST00000476139 CMA1P23946 247 aa19.25■□□□□ 0.67
TVP23B-202ENST00000476139 SLC4A8Q2Y0W8 1093 aa19.25■□□□□ 0.67
TVP23B-202ENST00000476139 FAM196AQ6ZSG2 479 aa19.25■□□□□ 0.67
TVP23B-202ENST00000476139 DHX40Q8IX18 779 aaKnown RBP19.25■□□□□ 0.67
TVP23B-202ENST00000476139 ENAHQ8N8S7 591 aaPredicted RBP19.25■□□□□ 0.67
TVP23B-202ENST00000476139 CACNA1SQ13698 1873 aa19.25■□□□□ 0.67
TVP23B-202ENST00000476139 hCG_1642624A0A1W2PR95 340 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 BIN1O00499 593 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 TMTC2Q8N394 836 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 KIAA1468Q9P260 1216 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 GOLGA6L19H0YKK7 550 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 TRAPPC3LQ5T215 181 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 SHC4Q6S5L8 630 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 BCL11BQ9C0K0 894 aaPredicted RBP19.24■□□□□ 0.67
TVP23B-202ENST00000476139 LRRC4BQ9NT99 713 aa19.24■□□□□ 0.67
TVP23B-202ENST00000476139 GOLGA6L6A8MZA4 724 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 NR5A1Q13285 461 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 ZNF831Q5JPB2 1677 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 ISM2Q6H9L7 571 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 TRIM22Q8IYM9 498 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 ANKRD2Q9GZV1 360 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 ANO10Q9NW15 660 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 CHD4Q14839 1912 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 BTAF1O14981 1849 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 NMT2O60551 498 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 CAVIN2O95810 425 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 MMP1P03956 469 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 NFIXQ14938 502 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 DPCR1Q3MIW9 517 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 DIS3L2Q8IYB7 885 aaKnown RBP19.23■□□□□ 0.67
TVP23B-202ENST00000476139 GJD4Q96KN9 370 aaPredicted RBP19.23■□□□□ 0.67
TVP23B-202ENST00000476139 ZSCAN10Q96SZ4 725 aaPredicted RBP19.23■□□□□ 0.67
TVP23B-202ENST00000476139 BRIP1Q9BX63 1249 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 TIAM2Q8IVF5 1701 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 BECN2A8MW95 431 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 DYNC1I1O14576 645 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 RGL2O15211 777 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 TOB1P50616 345 aaPredicted RBP19.23■□□□□ 0.67
TVP23B-202ENST00000476139 SPECC1Q5M775 1068 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 NOSTRINQ8IVI9 506 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 ANKIB1Q9P2G1 1089 aa19.23■□□□□ 0.67
TVP23B-202ENST00000476139 RGS22Q8NE09 1264 aa19.22■□□□□ 0.67
TVP23B-202ENST00000476139 OXER1Q8TDS5 423 aa19.22■□□□□ 0.67
TVP23B-202ENST00000476139 GPR101Q96P66 508 aaPredicted RBP19.22■□□□□ 0.67
TVP23B-202ENST00000476139 MYRIPQ8NFW9 859 aa19.22■□□□□ 0.67
TVP23B-202ENST00000476139 SHISA4Q96DD7 197 aa19.22■□□□□ 0.67
TVP23B-202ENST00000476139 DCP1AQ9NPI6 582 aaPredicted RBP19.22■□□□□ 0.67
TVP23B-202ENST00000476139 SPTLC3Q9NUV7 552 aa19.22■□□□□ 0.67
TVP23B-202ENST00000476139 CASZ1Q86V15 1759 aa19.22■□□□□ 0.67
TVP23B-202ENST00000476139 SEMA3EO15041 775 aa19.21■□□□□ 0.67
TVP23B-202ENST00000476139 CYP2D6P10635 497 aa19.21■□□□□ 0.67
TVP23B-202ENST00000476139 AOPEPQ8N6M6 819 aa19.21■□□□□ 0.67
TVP23B-202ENST00000476139 SCN7AQ01118 1682 aa19.21■□□□□ 0.67
TVP23B-202ENST00000476139 BAZ2AQ9UIF9 1905 aaKnown RBP19.21■□□□□ 0.67
TVP23B-202ENST00000476139 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
TVP23B-202ENST00000476139 ARID5BQ14865 1188 aa19.21■□□□□ 0.67
TVP23B-202ENST00000476139 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
TVP23B-202ENST00000476139 A0A1B0GUL6 1792 aa19.21■□□□□ 0.67
TVP23B-202ENST00000476139 CCDC196A0A1B0GTZ2 297 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 PPP6R2O75170 966 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 SYKP43405 635 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 FAM47AQ5JRC9 791 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 IFIT1BQ5T764 474 aaKnown RBP19.2■□□□□ 0.66
TVP23B-202ENST00000476139 WASF1Q92558 559 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 MTA3Q9BTC8 594 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 NID2Q14112 1375 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 DEXIO95424 95 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 ATP2B1P20020 1258 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 GRIN1Q05586 938 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 CEP57L1Q8IYX8 460 aa19.2■□□□□ 0.66
TVP23B-202ENST00000476139 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
TVP23B-202ENST00000476139 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.19■□□□□ 0.66
TVP23B-202ENST00000476139 HPSEQ9Y251 543 aa19.19■□□□□ 0.66
TVP23B-202ENST00000476139 SAFBQ15424 915 aaKnown RBP eCLIP19.19■□□□□ 0.66
TVP23B-202ENST00000476139 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
TVP23B-202ENST00000476139 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
TVP23B-202ENST00000476139 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
TVP23B-202ENST00000476139 IRS2Q9Y4H2 1338 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 FGRP09769 529 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 GRIK5Q16478 980 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 GLIPR1L2Q4G1C9 344 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 IQCA1Q86XH1 822 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 PCDHB6Q9Y5E3 794 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 TROAPQ12815 778 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms