RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
CCDC57-208ENST00000475635 UBE2Q1Q7Z7E8 422 aa15.32■□□□□ 0.04
CCDC57-208ENST00000475635 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
CCDC57-208ENST00000475635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC57-208ENST00000475635 MAP4K4O95819 1239 aaPredicted RBP15.31■□□□□ 0.04
CCDC57-208ENST00000475635 TRIM27P14373 513 aa15.31■□□□□ 0.04
CCDC57-208ENST00000475635 ARID4AP29374 1257 aaPredicted RBP15.31■□□□□ 0.04
CCDC57-208ENST00000475635 ANKRD13CQ8N6S4 541 aa15.31■□□□□ 0.04
CCDC57-208ENST00000475635 PXYLP1Q8TE99 480 aa15.31■□□□□ 0.04
CCDC57-208ENST00000475635 HTATIP2Q9BUP3 242 aa15.31■□□□□ 0.04
CCDC57-208ENST00000475635 OSBPL5Q9H0X9 879 aaPredicted RBP15.31■□□□□ 0.04
CCDC57-208ENST00000475635 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
CCDC57-208ENST00000475635 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
CCDC57-208ENST00000475635 PNMA6EA0A0J9YXQ4 647 aa15.3■□□□□ 0.04
CCDC57-208ENST00000475635 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
CCDC57-208ENST00000475635 FARP2O94887 1054 aaPredicted RBP15.3■□□□□ 0.04
CCDC57-208ENST00000475635 SGPL1O95470 568 aa15.3■□□□□ 0.04
CCDC57-208ENST00000475635 GNAI2P04899 355 aa15.3■□□□□ 0.04
CCDC57-208ENST00000475635 INHAP05111 366 aa15.3■□□□□ 0.04
CCDC57-208ENST00000475635 MCAMP43121 646 aa15.3■□□□□ 0.04
CCDC57-208ENST00000475635 IRF5Q13568 498 aa15.3■□□□□ 0.04
CCDC57-208ENST00000475635 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
CCDC57-208ENST00000475635 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
CCDC57-208ENST00000475635 SPP2Q13103 211 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 G3BP1Q13283 466 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC57-208ENST00000475635 FAM110CQ1W6H9 321 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 TEX11Q8IYF3 940 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 ZNF280CQ8ND82 737 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 FRAT1Q92837 279 aaPredicted RBP15.29■□□□□ 0.04
CCDC57-208ENST00000475635 COA7Q96BR5 231 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 LRP2BPQ9P2M1 347 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
CCDC57-208ENST00000475635 BCAR3O75815 825 aa15.28■□□□□ 0.04
CCDC57-208ENST00000475635 UQCRFS1P1P0C7P4 283 aa15.28■□□□□ 0.04
CCDC57-208ENST00000475635 CAP2P40123 477 aa15.28■□□□□ 0.04
CCDC57-208ENST00000475635 HMGCS2P54868 508 aa15.28■□□□□ 0.04
CCDC57-208ENST00000475635 RRP1BQ14684 758 aaKnown RBP15.28■□□□□ 0.04
CCDC57-208ENST00000475635 SH3RF3Q8TEJ3 882 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-208ENST00000475635 TBC1D2Q9BYX2 928 aa15.28■□□□□ 0.04
CCDC57-208ENST00000475635 RBM27Q9P2N5 1060 aaKnown RBP15.28■□□□□ 0.04
CCDC57-208ENST00000475635 TFRCP02786 760 aaKnown RBP15.27■□□□□ 0.04
CCDC57-208ENST00000475635 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC57-208ENST00000475635 CLUAP1Q96AJ1 413 aa15.27■□□□□ 0.04
CCDC57-208ENST00000475635 DEFB118Q96PH6 123 aa15.27■□□□□ 0.04
CCDC57-208ENST00000475635 NOL10Q9BSC4 688 aaKnown RBP15.27■□□□□ 0.04
CCDC57-208ENST00000475635 HERC5Q9UII4 1024 aaKnown RBP15.27■□□□□ 0.04
CCDC57-208ENST00000475635 NR2E3Q9Y5X4 410 aa15.27■□□□□ 0.04
CCDC57-208ENST00000475635 LAMA3Q16787 3333 aa15.27■□□□□ 0.03
CCDC57-208ENST00000475635 DDX60LQ5H9U9 1706 aaKnown RBP15.26■□□□□ 0.03
CCDC57-208ENST00000475635 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
CCDC57-208ENST00000475635 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
CCDC57-208ENST00000475635 GCLCP48506 637 aaPredicted RBP15.26■□□□□ 0.03
CCDC57-208ENST00000475635 AS3MTQ9HBK9 375 aa15.26■□□□□ 0.03
CCDC57-208ENST00000475635 PAK6Q9NQU5 681 aaPredicted RBP15.26■□□□□ 0.03
CCDC57-208ENST00000475635 SNRKQ9NRH2 765 aa15.26■□□□□ 0.03
CCDC57-208ENST00000475635 AATFQ9NY61 560 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC57-208ENST00000475635 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
CCDC57-208ENST00000475635 ZBTB7BO15156 539 aaPredicted RBP15.25■□□□□ 0.03
CCDC57-208ENST00000475635 BAG3O95817 575 aa15.25■□□□□ 0.03
CCDC57-208ENST00000475635 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
CCDC57-208ENST00000475635 NAA16Q6N069 864 aaPredicted RBP15.25■□□□□ 0.03
CCDC57-208ENST00000475635 CRISPLD2Q9H0B8 497 aa15.25■□□□□ 0.03
CCDC57-208ENST00000475635 ASCC2Q9H1I8 757 aaPredicted RBP15.25■□□□□ 0.03
CCDC57-208ENST00000475635 DHX36Q9H2U1 1008 aaKnown RBP15.25■□□□□ 0.03
CCDC57-208ENST00000475635 EVI5O60447 810 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 PLCG2P16885 1265 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 CAPN2P17655 700 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 MTMR2Q13614 643 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 TNNI3KQ59H18 835 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 SH3D19Q5HYK7 790 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 CCDC158Q5M9N0 1113 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 TMEM57Q8N5G2 664 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 DBNDD2Q9BQY9 259 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCDC57-208ENST00000475635 PRO3102Q9H379 93 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 GPR108Q9NPR9 543 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 FPGT-TNNI3KV9GXZ4 949 aa15.24■□□□□ 0.03
CCDC57-208ENST00000475635 FLT1P17948 1338 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 FRMPD3Q5JV73 1810 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 ASNSP08243 561 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 OS9Q13438 667 aaPredicted RBP15.23■□□□□ 0.03
CCDC57-208ENST00000475635 POLA2Q14181 598 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 MAPKAPK5Q8IW41 473 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 WDR18Q9BV38 432 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 MYH8P13535 1937 aa15.23■□□□□ 0.03
CCDC57-208ENST00000475635 HMGCRP04035 888 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 CYP2E1P05181 493 aaPredicted RBP15.22■□□□□ 0.03
CCDC57-208ENST00000475635 BACE1P56817 501 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 PPP4CP60510 307 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 IRX3P78415 501 aaPredicted RBP15.22■□□□□ 0.03
CCDC57-208ENST00000475635 ZKSCAN2Q63HK3 967 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 SSH3Q8TE77 659 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 DIS3LQ8TF46 1054 aaKnown RBP15.22■□□□□ 0.03
CCDC57-208ENST00000475635 PAWRQ96IZ0 340 aaKnown RBP15.22■□□□□ 0.03
CCDC57-208ENST00000475635 TRIM34Q9BYJ4 488 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 DNAJC18Q9H819 358 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 TMOD4Q9NZQ9 345 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms