RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 FIGNL2A6NMB9 653 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 TTLL8A6PVC2 850 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 GFRA2O00451 464 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 CAPN5O15484 640 aaPredicted RBP6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 HTR3BO95264 441 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 ACRP10323 421 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 NME1P15531 152 aaKnown RBP6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 ATP11AP98196 1134 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 SPEM2Q0P670 501 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 LBRQ14739 615 aaKnown RBP6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 ZNF787Q6DD87 383 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 CNNM4Q6P4Q7 775 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 LRRTM3Q86VH5 581 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 CHPFQ8IZ52 775 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 MYO1HQ8N1T3 1032 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 ATG4CQ96DT6 458 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 ARNT2Q9HBZ2 717 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 INTS7Q9NVH2 962 aaKnown RBP6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
SRGAP3-205ENST00000475560 DCDC2BA2VCK2 349 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 SLC22A31A6NKX4 558 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 TNFRSF10AO00220 468 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 AKAP10O43572 662 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 GDF9O60383 454 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 ARAFP10398 606 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 MAPTP10636 758 aaKnown RBP6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 CDK8P49336 464 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 MLECQ14165 292 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 RALBP1Q15311 655 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 FAM209AQ5JX71 171 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 ADAMTSL4Q6UY14 1074 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 VN1R5Q7Z5H4 357 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 TTC8Q8TAM2 541 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 KLHL6Q8WZ60 621 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 DDX1Q92499 740 aaKnown RBP6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 SLC30A3Q99726 388 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 CDC6Q99741 560 aa6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
SRGAP3-205ENST00000475560 MYL1P05976 194 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 ATF3P18847 181 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 SDSP20132 328 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 NEK2P51955 445 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 GPLD1P80108 840 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 SLC7A5Q01650 507 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 C4orf46Q504U0 113 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 CEP135Q66GS9 1140 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 MAP1SQ66K74 1059 aaPredicted RBP6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 HFE2Q6ZVN8 426 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 PDZD3Q86UT5 571 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 SAMD3Q8N6K7 520 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 IPO9Q96P70 1041 aaKnown RBP6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 TRERF1Q96PN7 1200 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 SLC9A7Q96T83 725 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 MRPL4Q9BYD3 311 aaKnown RBP6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 CACNA2D2Q9NY47 1150 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 SLC5A4Q9NY91 659 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 ZIM2Q9NZV7 527 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 GMIPQ9P107 970 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 HCN2Q9UL51 889 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 SOX13Q9UN79 622 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 CORINQ9Y5Q5 1042 aa6.6□□□□□ -1.35
SRGAP3-205ENST00000475560 TRBV23-1A0A0A0MS06 115 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 A0A1W2PQU0 124 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 AGRPO00253 132 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 TNFRSF10CO14798 259 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 DGAT1O75907 488 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 SMNDC1O75940 238 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 LDHAP00338 332 aaKnown RBP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 GHRHP01286 108 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 THBS1P07996 1170 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 SELPP16109 830 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 MLLT1Q03111 559 aaPredicted RBP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 UBAP2LQ14157 1087 aaKnown RBP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 GNPTABQ3T906 1256 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 SYCP2LQ5T4T6 812 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 PPP4R4Q6NUP7 873 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 MRPL14Q6P1L8 145 aaKnown RBP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 NLRC3Q7RTR2 1065 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 NECAB2Q7Z6G3 386 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 SCUBE1Q8IWY4 988 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 AHI1Q8N157 1196 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 WDR66Q8TBY9 1149 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 DDX54Q8TDD1 881 aaKnown RBP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 LEO1Q8WVC0 666 aaPredicted RBP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 UBE2Q2Q8WVN8 375 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 IL17RAQ96F46 866 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 MPHOSPH6Q99547 160 aaKnown RBP6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 CNNM2Q9H8M5 875 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 CHST12Q9NRB3 414 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 SNCAIPQ9Y6H5 919 aa6.59□□□□□ -1.35
SRGAP3-205ENST00000475560 SOS2Q07890 1332 aaPredicted RBP6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 TRAV20A0A0B4J274 112 aa6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 PPFIA4O75335 1185 aa6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 GSTP1P09211 210 aaKnown RBP6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 ESRRAP11474 423 aaPredicted RBP6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 MTMR1Q13613 665 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms