RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 WWC3Q9ULE0 1092 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 PPP1R9AQ9ULJ8 1098 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 SMG5Q9UPR3 1016 aaKnown RBP1.91□□□□□ -2.1
HDAC9-222ENST00000474742 ETV2O00321 342 aaPredicted RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 EIF1AYO14602 144 aaKnown RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 TMPRSS2O15393 492 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 TREHO43280 583 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 GADD45BO75293 160 aaPredicted RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 B3GALT4O96024 378 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 SYN1P17600 705 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 HOXA5P20719 270 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 CLCN7P51798 805 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 PPP2R3AQ06190 1150 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 KCNA1Q09470 495 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 CDKAL1Q5VV42 579 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 KIAA0319Q5VV43 1072 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 DNAJC14Q6Y2X3 702 aaPredicted RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 NPAS4Q8IUM7 802 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 CCNJLQ8IV13 435 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 ABHD4Q8TB40 342 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 CCDC74AQ96AQ1 378 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 ALKBH8Q96BT7 664 aaKnown RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 WDR89Q96FK6 387 aaPredicted RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 BORCS6Q96GS4 357 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 CCDC86Q9H6F5 360 aaKnown RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 NPHS2Q9NP85 383 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 PARD6AQ9NPB6 346 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 GPN3Q9UHW5 284 aaPredicted RBP1.9□□□□□ -2.11
HDAC9-222ENST00000474742 DCTN4Q9UJW0 460 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 PLAGL2Q9UPG8 496 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 MTMR7Q9Y216 660 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 U3KQE9 123 aa1.9□□□□□ -2.11
HDAC9-222ENST00000474742 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 NDUFB5O43674 189 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 FOXD2O60548 495 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 P4HBP07237 508 aaKnown RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 GSTP1P09211 210 aaKnown RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 MAPK1P28482 360 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 LINC00310P59036 64 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 TAGLNQ01995 201 aaKnown RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 FMR1Q06787 632 aaKnown RBP eCLIP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 PDE4CQ08493 712 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 FAAP100Q0VG06 881 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 GRM2Q14416 872 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 NFIXQ14938 502 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 ENOX2Q16206 610 aaKnown RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 PRRT2Q7Z6L0 340 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 TTC6Q86TZ1 520 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 CILP2Q8IUL8 1156 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 AEBP1Q8IUX7 1158 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 ISL2Q96A47 359 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 SYTL4Q96C24 671 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 CITED4Q96RK1 184 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 SLC26A8Q96RN1 970 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 OSBPL7Q9BZF2 842 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 FOXQ1Q9C009 403 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 TNKS2Q9H2K2 1166 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 ZNF576Q9H609 170 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 KCNK12Q9HB15 430 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 CBX8Q9HC52 389 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 ABCB6Q9NP58 842 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 PRDM10Q9NQV6 1147 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 PRDM5Q9NQX1 630 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 DISC1Q9NRI5 854 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 PPP4R2Q9NY27 417 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 SLAMF8Q9P0V8 285 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 BIN2Q9UBW5 565 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 TPX2Q9ULW0 747 aaKnown RBP1.89□□□□□ -2.11
HDAC9-222ENST00000474742 JAG2Q9Y219 1238 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 SYNGAP1Q96PV0 1343 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 CNTNAP4Q9C0A0 1308 aa1.89□□□□□ -2.11
HDAC9-222ENST00000474742 PNMA6FA0A0J9YX94 578 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 H3BS24 57 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 RBAK-RBAKDNI3L0D1 243 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 RFXAPO00287 272 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 IGF2BP3O00425 579 aaKnown RBP eCLIP1.88□□□□□ -2.11
HDAC9-222ENST00000474742 CPNE3O75131 537 aaKnown RBP1.88□□□□□ -2.11
HDAC9-222ENST00000474742 SASH1O94885 1247 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 ITPKAP23677 461 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 GDNFP39905 211 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 HK2P52789 917 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 PDE3BQ13370 1112 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 KIF4BQ2VIQ3 1234 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 RASIP1Q5U651 963 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 TCERG1LQ5VWI1 586 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 MAP1SQ66K74 1059 aaPredicted RBP1.88□□□□□ -2.11
HDAC9-222ENST00000474742 DTHD1Q6ZMT9 781 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 SND1Q7KZF4 910 aaKnown RBP eCLIP1.88□□□□□ -2.11
HDAC9-222ENST00000474742 SPACA3Q8IXA5 215 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 RNF214Q8ND24 703 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 C3orf58Q8NDZ4 430 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 TMC1Q8TDI8 760 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 STK35Q8TDR2 534 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 MYLIPQ8WY64 445 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 DMRTB1Q96MA1 342 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 HEXIM2Q96MH2 286 aaKnown RBP1.88□□□□□ -2.11
HDAC9-222ENST00000474742 HSPA12BQ96MM6 686 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 ASB16Q96NS5 453 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 ALPK1Q96QP1 1244 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 DNAJC25Q9H1X3 360 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms