RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 MKRN1Q9UHC7 482 aaKnown RBP7.28□□□□□ -1.24
CLK1-210ENST00000473565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.28□□□□□ -1.24
CLK1-210ENST00000473565 ECM29Q5VYK3 1845 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 SCN9AQ15858 1988 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 ERICH2A1L162 156 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 C21orf2O43822 256 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 ZBTB7AO95365 584 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 POLR3DP05423 398 aaPredicted RBP7.27□□□□□ -1.24
CLK1-210ENST00000473565 XRCC6P12956 609 aaKnown RBP eCLIP7.27□□□□□ -1.24
CLK1-210ENST00000473565 LIFRP42702 1097 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 KRT85P78386 507 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 GSTO1P78417 241 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 PICALMQ13492 652 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 SART3Q15020 963 aaKnown RBP7.27□□□□□ -1.24
CLK1-210ENST00000473565 SEC23AQ15436 765 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 NTRK3Q16288 839 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 TMC4Q7Z404 712 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 TEX11Q8IYF3 940 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 TMEM87AQ8NBN3 555 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 ZSCAN10Q96SZ4 725 aaPredicted RBP7.27□□□□□ -1.24
CLK1-210ENST00000473565 NOL10Q9BSC4 688 aaKnown RBP7.27□□□□□ -1.24
CLK1-210ENST00000473565 COA1Q9GZY4 146 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 TTF2Q9UNY4 1162 aaKnown RBP7.27□□□□□ -1.24
CLK1-210ENST00000473565 MTMR7Q9Y216 660 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 DAGLAQ9Y4D2 1042 aa7.27□□□□□ -1.24
CLK1-210ENST00000473565 KIF28PB7ZC32 967 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 DHX16O60231 1041 aaKnown RBP7.27□□□□□ -1.25
CLK1-210ENST00000473565 BAG3O95817 575 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 AOC3Q16853 763 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 LEO1Q8WVC0 666 aaPredicted RBP7.27□□□□□ -1.25
CLK1-210ENST00000473565 ALG1Q9BT22 464 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 TMX4Q9H1E5 349 aaPredicted RBP7.27□□□□□ -1.25
CLK1-210ENST00000473565 NAV1Q8NEY1 1877 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 USP17L3A6NCW0 530 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 USP17L4A6NCW7 530 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 MBD3O95983 291 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 RHBDL3P58872 404 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 RTN1Q16799 776 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 C12orf60Q5U649 245 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 GIMAP6Q6P9H5 292 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 SYNE3Q6ZMZ3 975 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 KIAA0825Q8IV33 1275 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 PIBF1Q8WXW3 757 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 SPATA32Q96LK8 384 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 USP28Q96RU2 1077 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 ARPP21Q9UBL0 812 aaPredicted RBP7.27□□□□□ -1.25
CLK1-210ENST00000473565 FAM205AQ6ZU69 1335 aa7.27□□□□□ -1.25
CLK1-210ENST00000473565 GPR75-ASB3A0A0A6YYF3 556 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 TSPY2A6NKD2 308 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 LDHCP07864 332 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 LIG1P18858 919 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 IARSP41252 1262 aaKnown RBP7.26□□□□□ -1.25
CLK1-210ENST00000473565 CACNB3P54284 484 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 PPP4CP60510 307 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 IFIT1BQ5T764 474 aaKnown RBP7.26□□□□□ -1.25
CLK1-210ENST00000473565 RASGRP2Q7LDG7 609 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 FBXO18Q8NFZ0 1043 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 PLEKHA8P1O95397 391 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 FGRP09769 529 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 FLT1P17948 1338 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 UBE2HP62256 183 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 TFAP4Q01664 338 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 STYK1Q6J9G0 422 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 TBC1D22AQ8WUA7 517 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 PGBD1Q96JS3 809 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 GRPEL1Q9HAV7 217 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 ATF5Q9Y2D1 282 aaPredicted RBP7.26□□□□□ -1.25
CLK1-210ENST00000473565 MYH15Q9Y2K3 1946 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 KIF3AQ9Y496 699 aa7.26□□□□□ -1.25
CLK1-210ENST00000473565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 ECE2O60344 883 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 SBK1Q52WX2 424 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 KRT40Q6A162 431 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 IQCA1Q86XH1 822 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 FANCBQ8NB91 859 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 MKNK2Q9HBH9 465 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 DDX4Q9NQI0 724 aaKnown RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 IL17RBQ9NRM6 502 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 KCNJ14Q9UNX9 436 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 GAKO14976 1311 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 MYH1P12882 1939 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 ORC4O43929 436 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 DPEP1P16444 411 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 PDE4BQ07343 736 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 RNF214Q8ND24 703 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 C7orf43Q8WVR3 580 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 ZSCAN16Q9H4T2 348 aaPredicted RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 PPP1R1BQ9UD71 204 aaPredicted RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 SLC3A2P08195 630 aaKnown RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 KIF23Q02241 960 aaPredicted RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 SSRP1Q08945 709 aaKnown RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 NFIAQ12857 509 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 CAMK4Q16566 473 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 RCSD1Q6JBY9 416 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 CPLX2Q6PUV4 134 aaKnown RBP7.25□□□□□ -1.25
CLK1-210ENST00000473565 KLHL34Q8N239 644 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 CNKSR1Q969H4 720 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 SHISA4Q96DD7 197 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 EYA3Q99504 573 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms