RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, human

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS45-206	ENST00000472756	IRF2BPL	Q9H1B7	796 aa		4.21	□□□□□ -1.74
VPS45-206	ENST00000472756	SP110	Q9HB58	689 aa		4.21	□□□□□ -1.74
VPS45-206	ENST00000472756	ATP13A1	Q9HD20	1204 aa		4.21	□□□□□ -1.74
VPS45-206	ENST00000472756	ABCB6	Q9NP58	842 aa		4.21	□□□□□ -1.74
VPS45-206	ENST00000472756	PRDM10	Q9NQV6	1147 aa		4.21	□□□□□ -1.74
VPS45-206	ENST00000472756	RNGTT	O60942	597 aa	Known RBP	4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	ATP2B4	P23634	1241 aa		4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	RING1	Q06587	406 aa		4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	PRPF40B	Q6NWY9	871 aa	Known RBP	4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	KCNN1	Q92952	543 aa		4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	XYLT2	Q9H1B5	865 aa		4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	CNTNAP4	Q9C0A0	1308 aa		4.2	□□□□□ -1.74
VPS45-206	ENST00000472756	TRIM13	O60858	407 aa		4.19	□□□□□ -1.74
VPS45-206	ENST00000472756	NFIX	Q14938	502 aa		4.19	□□□□□ -1.74
VPS45-206	ENST00000472756	UBE3D	Q7Z6J8	389 aa		4.19	□□□□□ -1.74
VPS45-206	ENST00000472756	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
VPS45-206	ENST00000472756	MAPK8IP1	Q9UQF2	711 aa		4.19	□□□□□ -1.74
VPS45-206	ENST00000472756	ST14	Q9Y5Y6	855 aa		4.19	□□□□□ -1.74
VPS45-206	ENST00000472756	CECR2	Q9BXF3	1484 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	BMP7	P18075	431 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	USPL1	Q5W0Q7	1092 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	CCDC120	Q96HB5	630 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	HSPA12B	Q96MM6	686 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	ALPK1	Q96QP1	1244 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	TMPRSS5	Q9H3S3	457 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	ZCCHC4	Q9H5U6	513 aa		4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	RSF1	Q96T23	1441 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS45-206	ENST00000472756	MYOCOS	A0A1B0GUC4	107 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	PRR33	A8MZF0	331 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	HPX	P02790	462 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	MTMR3	Q13615	1198 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	ABHD4	Q8TB40	342 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	STK35	Q8TDR2	534 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	MCOLN1	Q9GZU1	580 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	GCM1	Q9NP62	436 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	CCDC87	Q9NVE4	849 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	RB1CC1	Q8TDY2	1594 aa		4.17	□□□□□ -1.74
VPS45-206	ENST00000472756	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS45-206	ENST00000472756	ADRB1	P08588	477 aa		4.16	□□□□□ -1.74
VPS45-206	ENST00000472756	DLG4	P78352	724 aa		4.16	□□□□□ -1.74
VPS45-206	ENST00000472756	ZNF252P-AS1	Q0IIN9	211 aa		4.16	□□□□□ -1.74
VPS45-206	ENST00000472756	PRRT2	Q7Z6L0	340 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS45-206	ENST00000472756	TMEM238L	A0A1B0GVL6	79 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	GNAT3	A8MTJ3	354 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	PEX10	O60683	326 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	FAM13A	O94988	1023 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	ERVFC1	P60507	584 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	THAP5	Q7Z6K1	395 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	FOXQ1	Q9C009	403 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	CAPN6	Q9Y6Q1	641 aa		4.15	□□□□□ -1.75
VPS45-206	ENST00000472756	DNAJC25-GNG10	A0A024R161	153 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	SEMA7A	O75326	666 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	SLITRK5	O94991	958 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	PRKCSH	P14314	528 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	EFEMP1	Q12805	493 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	RALGPS1	Q5JS13	557 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	DNAJC25	Q9H1X3	360 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	EHD4	Q9H223	541 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	MROH2B	Q7Z745	1585 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	BICRA	Q9NZM4	1560 aa		4.14	□□□□□ -1.75
VPS45-206	ENST00000472756	PSPN	O60542	156 aa		4.13	□□□□□ -1.75
VPS45-206	ENST00000472756	ESR1	P03372	595 aa		4.13	□□□□□ -1.75
VPS45-206	ENST00000472756	ZNF157	P51786	506 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS45-206	ENST00000472756	TTC6	Q86TZ1	520 aa		4.13	□□□□□ -1.75
VPS45-206	ENST00000472756	IRF2BP1	Q8IU81	584 aa		4.13	□□□□□ -1.75
VPS45-206	ENST00000472756	MYLIP	Q8WY64	445 aa		4.13	□□□□□ -1.75
VPS45-206	ENST00000472756	BORCS6	Q96GS4	357 aa		4.13	□□□□□ -1.75
VPS45-206	ENST00000472756	TEX51	A0A1B0GUA7	166 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	OTOL1	A6NHN0	477 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	FANCG	O15287	622 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	IGHA2	P01877	340 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	RAC2	P15153	192 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	ARNT	P27540	789 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	SSFA2	P28290	1259 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	PPM1J	Q5JR12	505 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	ZBTB37	Q5TC79	503 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	TCERG1L	Q5VWI1	586 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	MFSD4A	Q8N468	514 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	GPBAR1	Q8TDU6	330 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	RNF32	Q9H0A6	362 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	ZNF552	Q9H707	407 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	SSU72	Q9NP77	194 aa	Known RBP	4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	NPHS2	Q9NP85	383 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	TMEM39A	Q9NV64	488 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	TMEM59L	Q9UK28	342 aa		4.12	□□□□□ -1.75
VPS45-206	ENST00000472756	ZNF777	Q9ULD5	760 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS45-206	ENST00000472756		H3BS24	57 aa		4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	RBAK-RBAKDN	I3L0D1	243 aa		4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	LRIG2	O94898	1065 aa		4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	CELA3B	P08861	270 aa		4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	CAP2	P40123	477 aa		4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	SF3B2	Q13435	895 aa	Known RBP	4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	MPRIP	Q6WCQ1	1025 aa		4.11	□□□□□ -1.75
VPS45-206	ENST00000472756	ARMCX6	Q7L4S7	300 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms