RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
VPS45-206ENST00000472756 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
VPS45-206ENST00000472756 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
VPS45-206ENST00000472756 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
VPS45-206ENST00000472756 FOXD1Q16676 465 aa15.14■□□□□ 0.01
VPS45-206ENST00000472756 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
VPS45-206ENST00000472756 MSH5O43196 834 aa14.25□□□□□ -0.13
VPS45-206ENST00000472756 PIAS4Q8N2W9 510 aaPredicted RBP13.94□□□□□ -0.18
VPS45-206ENST00000472756 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
VPS45-206ENST00000472756 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
VPS45-206ENST00000472756 ADRA2BP18089 450 aa13.75□□□□□ -0.21
VPS45-206ENST00000472756 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
VPS45-206ENST00000472756 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
VPS45-206ENST00000472756 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.41
VPS45-206ENST00000472756 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
VPS45-206ENST00000472756 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
VPS45-206ENST00000472756 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
VPS45-206ENST00000472756 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
VPS45-206ENST00000472756 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
VPS45-206ENST00000472756 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
VPS45-206ENST00000472756 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
VPS45-206ENST00000472756 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
VPS45-206ENST00000472756 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
VPS45-206ENST00000472756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS45-206ENST00000472756 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
VPS45-206ENST00000472756 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
VPS45-206ENST00000472756 POTEHQ6S545 545 aa11.32□□□□□ -0.6
VPS45-206ENST00000472756 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
VPS45-206ENST00000472756 DSG3P32926 999 aa11.27□□□□□ -0.61
VPS45-206ENST00000472756 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.61
VPS45-206ENST00000472756 CAPN15O75808 1086 aa11.1□□□□□ -0.63
VPS45-206ENST00000472756 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
VPS45-206ENST00000472756 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
VPS45-206ENST00000472756 ABCB7O75027 752 aa10.83□□□□□ -0.68
VPS45-206ENST00000472756 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
VPS45-206ENST00000472756 KCNA4P22459 653 aa10.8□□□□□ -0.68
VPS45-206ENST00000472756 APLP2Q06481 763 aa10.8□□□□□ -0.68
VPS45-206ENST00000472756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
VPS45-206ENST00000472756 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
VPS45-206ENST00000472756 SAMD1Q6SPF0 538 aaPredicted RBP10.69□□□□□ -0.7
VPS45-206ENST00000472756 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
VPS45-206ENST00000472756 CHRDL2Q6WN34 429 aa10.63□□□□□ -0.71
VPS45-206ENST00000472756 POLA2Q14181 598 aa10.53□□□□□ -0.72
VPS45-206ENST00000472756 MYCNP04198 464 aaPredicted RBP10.47□□□□□ -0.73
VPS45-206ENST00000472756 SP7Q8TDD2 431 aaPredicted RBP10.44□□□□□ -0.74
VPS45-206ENST00000472756 AKT1S1Q96B36 256 aa10.4□□□□□ -0.74
VPS45-206ENST00000472756 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
VPS45-206ENST00000472756 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
VPS45-206ENST00000472756 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
VPS45-206ENST00000472756 ZBTB12Q9Y330 459 aaPredicted RBP10.26□□□□□ -0.77
VPS45-206ENST00000472756 FXR2P51116 673 aaKnown RBP eCLIP10.24□□□□□ -0.77
VPS45-206ENST00000472756 PITPNM1O00562 1244 aa10.19□□□□□ -0.78
VPS45-206ENST00000472756 OSCARQ8IYS5 282 aa10.19□□□□□ -0.78
VPS45-206ENST00000472756 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
VPS45-206ENST00000472756 HAX1O00165 279 aa10.13□□□□□ -0.79
VPS45-206ENST00000472756 EVX2Q03828 476 aa10.13□□□□□ -0.79
VPS45-206ENST00000472756 SLC4A1APQ9BWU0 796 aaKnown RBP10.05□□□□□ -0.8
VPS45-206ENST00000472756 ZBTB22O15209 634 aa9.98□□□□□ -0.81
VPS45-206ENST00000472756 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
VPS45-206ENST00000472756 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
VPS45-206ENST00000472756 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
VPS45-206ENST00000472756 ATXN8OSP0DMR3 200 aa9.94□□□□□ -0.82
VPS45-206ENST00000472756 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
VPS45-206ENST00000472756 PRKAR2AP13861 404 aaKnown RBP9.88□□□□□ -0.83
VPS45-206ENST00000472756 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
VPS45-206ENST00000472756 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
VPS45-206ENST00000472756 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
VPS45-206ENST00000472756 GABBR2O75899 941 aa9.83□□□□□ -0.84
VPS45-206ENST00000472756 FBLN2P98095 1184 aa9.81□□□□□ -0.84
VPS45-206ENST00000472756 LHX8Q68G74 356 aa9.76□□□□□ -0.85
VPS45-206ENST00000472756 CLEC11AQ9Y240 323 aa9.75□□□□□ -0.85
VPS45-206ENST00000472756 ZNF692Q9BU19 519 aaPredicted RBP9.72□□□□□ -0.85
VPS45-206ENST00000472756 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
VPS45-206ENST00000472756 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
VPS45-206ENST00000472756 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
VPS45-206ENST00000472756 PABPN1Q86U42 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS45-206ENST00000472756 CLCN6P51797 869 aa9.55□□□□□ -0.88
VPS45-206ENST00000472756 FARP1Q9Y4F1 1045 aaPredicted RBP9.55□□□□□ -0.88
VPS45-206ENST00000472756 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
VPS45-206ENST00000472756 ZNF579Q8NAF0 562 aaKnown RBP9.45□□□□□ -0.9
VPS45-206ENST00000472756 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
VPS45-206ENST00000472756 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
VPS45-206ENST00000472756 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
VPS45-206ENST00000472756 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
VPS45-206ENST00000472756 GALR2O43603 387 aaPredicted RBP9.33□□□□□ -0.92
VPS45-206ENST00000472756 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
VPS45-206ENST00000472756 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
VPS45-206ENST00000472756 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
VPS45-206ENST00000472756 PELP1Q8IZL8 1130 aaKnown RBP9.24□□□□□ -0.93
VPS45-206ENST00000472756 STAG3Q9UJ98 1225 aa9.24□□□□□ -0.93
VPS45-206ENST00000472756 POTEMA6NI47 508 aa9.19□□□□□ -0.94
VPS45-206ENST00000472756 PHF12Q96QT6 1004 aa9.19□□□□□ -0.94
VPS45-206ENST00000472756 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
VPS45-206ENST00000472756 ASTLQ6HA08 431 aaPredicted RBP9.16□□□□□ -0.94
VPS45-206ENST00000472756 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
VPS45-206ENST00000472756 POTEGQ6S5H5 508 aa9.15□□□□□ -0.94
VPS45-206ENST00000472756 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
VPS45-206ENST00000472756 PCDH10Q9P2E7 1040 aa9.11□□□□□ -0.95
VPS45-206ENST00000472756 ATMINO43313 823 aaPredicted RBP9.1□□□□□ -0.95
VPS45-206ENST00000472756 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms