RNA–Protein interactions for RNA: ENST00000471913.5

AMPH-208, Transcript of amphiphysin, humanhuman

TSL 1 (best)

Gene AMPH, Length 1,778 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-208ENST00000471913 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
AMPH-208ENST00000471913 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.21
AMPH-208ENST00000471913 LIFRP42702 1097 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 CCZ1BP86790 482 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 CCZ1P86791 482 aaPredicted RBP13.77□□□□□ -0.21
AMPH-208ENST00000471913 TRIM29Q14134 588 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 PTPN14Q15678 1187 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 AXDND1Q5T1B0 1012 aaPredicted RBP13.77□□□□□ -0.21
AMPH-208ENST00000471913 ALG1Q9BT22 464 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 ZMYND15Q9H091 742 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 CNNM2Q9H8M5 875 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 GPHNQ9NQX3 736 aaPredicted RBP13.77□□□□□ -0.21
AMPH-208ENST00000471913 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.77□□□□□ -0.21
AMPH-208ENST00000471913 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 AKAP11Q9UKA4 1901 aa13.77□□□□□ -0.21
AMPH-208ENST00000471913 CCP110O43303 1012 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 SLC5A1P13866 664 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 RCAN1P53805 252 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 UBE4AQ14139 1066 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
AMPH-208ENST00000471913 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 NEDD4P46934 1319 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
AMPH-208ENST00000471913 ZBTB43O43298 467 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 PFKFB1P16118 471 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 U2AF2P26368 475 aaKnown RBP eCLIP13.76□□□□□ -0.21
AMPH-208ENST00000471913 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
AMPH-208ENST00000471913 CRAMP1Q96RY5 1269 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
AMPH-208ENST00000471913 TIAM2Q8IVF5 1701 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 KIF28PB7ZC32 967 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 SNAP23O00161 211 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 SOCS7O14512 581 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 PDE6AP16499 860 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 GNAT2P19087 354 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 SYKP43405 635 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
AMPH-208ENST00000471913 DPCR1Q3MIW9 517 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 PPP4R3BQ5MIZ7 849 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 CCDC102BQ68D86 513 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 KRT40Q6A162 431 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 FILIP1Q7Z7B0 1213 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
AMPH-208ENST00000471913 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
AMPH-208ENST00000471913 KRT23Q9C075 422 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 NBPF3Q9H094 633 aa13.75□□□□□ -0.21
AMPH-208ENST00000471913 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
AMPH-208ENST00000471913 TCRBV5S4A2TA0A5A2 114 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 CUTAO60888 179 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 IARSP41252 1262 aaKnown RBP13.74□□□□□ -0.21
AMPH-208ENST00000471913 NCBP1Q09161 790 aaKnown RBP13.74□□□□□ -0.21
AMPH-208ENST00000471913 MAP3K12Q12852 859 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 OTUD7BQ6GQQ9 843 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 TBC1D10CQ8IV04 446 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 TSC1Q92574 1164 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 STRBPQ96SI9 672 aaKnown RBP13.74□□□□□ -0.21
AMPH-208ENST00000471913 ZNF532Q9HCE3 1301 aa13.74□□□□□ -0.21
AMPH-208ENST00000471913 PATL2C9JE40 543 aaKnown RBP13.73□□□□□ -0.21
AMPH-208ENST00000471913 IDH1O75874 414 aaKnown RBP13.73□□□□□ -0.21
AMPH-208ENST00000471913 BBOX1O75936 387 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 APPP05067 770 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 SFPQP23246 707 aaKnown RBP eCLIP13.73□□□□□ -0.21
AMPH-208ENST00000471913 PHKA1P46020 1223 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 RESP18Q5W5W9 173 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 NBPF11Q86T75 865 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 PDGFDQ9GZP0 370 aaPredicted RBP13.73□□□□□ -0.21
AMPH-208ENST00000471913 PIH1D3Q9NQM4 214 aaKnown RBP13.73□□□□□ -0.21
AMPH-208ENST00000471913 GOLGA8AA7E2F4 631 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 SRGNP10124 158 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 PDE6BP35913 854 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 PTPAQ15257 358 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 NTRK3Q16288 839 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 UTP14CQ5TAP6 766 aaKnown RBP13.73□□□□□ -0.21
AMPH-208ENST00000471913 PI16Q6UXB8 463 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 CYB5R4Q7L1T6 521 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 TMTC2Q8N394 836 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 LY9Q9HBG7 655 aa13.73□□□□□ -0.21
AMPH-208ENST00000471913 ZNF804BA4D1E1 1349 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 CCDC196A0A1B0GTZ2 297 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
AMPH-208ENST00000471913 ZBTB22O15209 634 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 SMC2O95347 1197 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
AMPH-208ENST00000471913 IFNAR1P17181 557 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 MYL5Q02045 173 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 SSRP1Q08945 709 aaKnown RBP13.72□□□□□ -0.21
AMPH-208ENST00000471913 NCAPHQ15003 741 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 SART3Q15020 963 aaKnown RBP13.72□□□□□ -0.21
AMPH-208ENST00000471913 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
AMPH-208ENST00000471913 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms