RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SENP2Q9HC62 589 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 RTCBQ9Y3I0 505 aaKnown RBP12.27□□□□□ -0.44
APLF-204ENST00000471727 RXRAP19793 462 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 CHAF1AQ13111 956 aaPredicted RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 SEC23AQ15436 765 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 RESP18Q5W5W9 173 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 MTERF4Q7Z6M4 381 aaKnown RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 DHX40Q8IX18 779 aaKnown RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 KRI1Q8N9T8 703 aaKnown RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 CRNKL1Q9BZJ0 848 aaKnown RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 KCNF1Q9H3M0 494 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 IMPACTQ9P2X3 320 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 TUBE1Q9UJT0 475 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 MINDY4BA8MYZ0 360 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 IKBKBO14920 756 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 ORC4O43929 436 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 DDAH1O94760 285 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 BMP15O95972 392 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 PTGS1P23219 599 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 GSDMDP57764 484 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 SBK1Q52WX2 424 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 CCDC144CPQ8IYA2 1237 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 CELF1Q92879 486 aaKnown RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 CCDC34Q96HJ3 373 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 ZSCAN10Q96SZ4 725 aaPredicted RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
APLF-204ENST00000471727 INCENPQ9NQS7 918 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 FAM13BQ9NYF5 915 aa12.26□□□□□ -0.45
APLF-204ENST00000471727 SCN7AQ01118 1682 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 UQCRHLA0A096LP55 91 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 PRPF3O43395 683 aaKnown RBP12.25□□□□□ -0.45
APLF-204ENST00000471727 WDHD1O75717 1129 aaPredicted RBP12.25□□□□□ -0.45
APLF-204ENST00000471727 UQCRHP07919 91 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 HMGB2P26583 209 aaKnown RBP12.25□□□□□ -0.45
APLF-204ENST00000471727 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 KANK3Q6NY19 840 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 CERS3Q8IU89 383 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
APLF-204ENST00000471727 MYRIPQ8NFW9 859 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
APLF-204ENST00000471727 GJB4Q9NTQ9 266 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 TNKSO95271 1327 aa12.25□□□□□ -0.45
APLF-204ENST00000471727 MYO5AQ9Y4I1 1855 aaKnown RBP12.24□□□□□ -0.45
APLF-204ENST00000471727 MARCKSP29966 332 aaPredicted RBP12.24□□□□□ -0.45
APLF-204ENST00000471727 IFIT1BQ5T764 474 aaKnown RBP12.24□□□□□ -0.45
APLF-204ENST00000471727 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
APLF-204ENST00000471727 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
APLF-204ENST00000471727 AOPEPQ8N6M6 819 aa12.24□□□□□ -0.45
APLF-204ENST00000471727 SDR42E1Q8WUS8 393 aa12.24□□□□□ -0.45
APLF-204ENST00000471727 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
APLF-204ENST00000471727 BRMS1Q9HCU9 246 aa12.24□□□□□ -0.45
APLF-204ENST00000471727 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
APLF-204ENST00000471727 SPATA31A6Q5VVP1 1343 aa12.24□□□□□ -0.45
APLF-204ENST00000471727 PTPREP23469 700 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 GTF2F1P35269 517 aaKnown RBP eCLIP12.23□□□□□ -0.45
APLF-204ENST00000471727 PDE4BQ07343 736 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 SHC4Q6S5L8 630 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 ADGRA1Q86SQ6 560 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 MPNDQ8N594 471 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 WDR66Q8TBY9 1149 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 NUP133Q8WUM0 1156 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 C8orf37Q96NL8 207 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
APLF-204ENST00000471727 PYCARDQ9ULZ3 195 aa12.23□□□□□ -0.45
APLF-204ENST00000471727 IQSEC3Q9UPP2 1182 aaPredicted RBP12.23□□□□□ -0.45
APLF-204ENST00000471727 BTBD18B2RXH4 712 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 GNPATO15228 680 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 CBFA2T2O43439 604 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 NRDCO43847 1150 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 GSTO1P78417 241 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 CT47A1Q5JQC4 288 aaPredicted RBP12.22□□□□□ -0.45
APLF-204ENST00000471727 CTR9Q6PD62 1173 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 OLFM4Q6UX06 510 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 ENAHQ8N8S7 591 aaPredicted RBP12.22□□□□□ -0.45
APLF-204ENST00000471727 ZKSCAN3Q9BRR0 538 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 KCNH3Q9ULD8 1083 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.22□□□□□ -0.45
APLF-204ENST00000471727 SRPRBQ9Y5M8 271 aaKnown RBP12.22□□□□□ -0.45
APLF-204ENST00000471727 DYNLL1P63167 89 aaKnown RBP12.22□□□□□ -0.45
APLF-204ENST00000471727 MECOMQ03112 1051 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 C15orf52Q6ZUT6 534 aaKnown RBP12.22□□□□□ -0.45
APLF-204ENST00000471727 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 CNNM3Q8NE01 707 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 OSBPL5Q9H0X9 879 aaPredicted RBP12.22□□□□□ -0.45
APLF-204ENST00000471727 KCND1Q9NSA2 647 aa12.22□□□□□ -0.45
APLF-204ENST00000471727 COL1A1P02452 1464 aaPredicted RBP12.21□□□□□ -0.45
APLF-204ENST00000471727 CHD4Q14839 1912 aa12.21□□□□□ -0.45
APLF-204ENST00000471727 USP17L12C9JPN9 530 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms