RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 PRDM10Q9NQV6 1147 aa3.92□□□□□ -1.78
COMMD3-209ENST00000471350 BIN2Q9UBW5 565 aaPredicted RBP3.92□□□□□ -1.78
COMMD3-209ENST00000471350 CTNND2Q9UQB3 1225 aa3.92□□□□□ -1.78
COMMD3-209ENST00000471350 PRR33A8MZF0 331 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 TREHO43280 583 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 FARP2O94887 1054 aaPredicted RBP3.91□□□□□ -1.78
COMMD3-209ENST00000471350 PTPN11Q06124 597 aaPredicted RBP3.91□□□□□ -1.78
COMMD3-209ENST00000471350 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.91□□□□□ -1.78
COMMD3-209ENST00000471350 ANGEL2Q5VTE6 544 aaKnown RBP3.91□□□□□ -1.78
COMMD3-209ENST00000471350 ARHGAP27Q6ZUM4 889 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.91□□□□□ -1.78
COMMD3-209ENST00000471350 RETREG2Q8NC44 543 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 EMILIN2Q9BXX0 1053 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 SSU72Q9NP77 194 aaKnown RBP3.91□□□□□ -1.78
COMMD3-209ENST00000471350 SEMA3GQ9NS98 782 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 SAMM50Q9Y512 469 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 CSADQ9Y600 493 aa3.91□□□□□ -1.78
COMMD3-209ENST00000471350 TRIM37O94972 964 aa3.9□□□□□ -1.79
COMMD3-209ENST00000471350 SLITRK5O94991 958 aa3.9□□□□□ -1.79
COMMD3-209ENST00000471350 PLCB3Q01970 1234 aa3.9□□□□□ -1.79
COMMD3-209ENST00000471350 SLBPQ14493 270 aaKnown RBP eCLIP3.9□□□□□ -1.79
COMMD3-209ENST00000471350 C12orf40Q86WS4 652 aa3.9□□□□□ -1.79
COMMD3-209ENST00000471350 ZSWIM9Q86XI8 627 aa3.9□□□□□ -1.79
COMMD3-209ENST00000471350 BHLHE22Q8NFJ8 381 aaPredicted RBP3.9□□□□□ -1.79
COMMD3-209ENST00000471350 FBRSQ9HAH7 460 aa3.9□□□□□ -1.79
COMMD3-209ENST00000471350 DCTN4Q9UJW0 460 aa3.9□□□□□ -1.79
COMMD3-209ENST00000471350 PNMA6FA0A0J9YX94 578 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 DCDC2CA8MYV0 355 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 FANCGO15287 622 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 ZP2Q05996 745 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 FMR1Q06787 632 aaKnown RBP eCLIP3.89□□□□□ -1.79
COMMD3-209ENST00000471350 INPP5AQ14642 412 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 LCNL1Q6ZST4 164 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 C22orf34Q6ZV56 151 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 CYFIP1Q7L576 1253 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 ZSCAN29Q8IWY8 852 aaPredicted RBP3.89□□□□□ -1.79
COMMD3-209ENST00000471350 ASB11Q8WXH4 323 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 GAL3ST3Q96A11 431 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 LIN37Q96GY3 246 aaPredicted RBP3.89□□□□□ -1.79
COMMD3-209ENST00000471350 GNEQ9Y223 722 aaKnown RBP3.89□□□□□ -1.79
COMMD3-209ENST00000471350 AKAP2Q9Y2D5 859 aa3.89□□□□□ -1.79
COMMD3-209ENST00000471350 FBXO24O75426 580 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 BRD1O95696 1058 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 CELA3AP09093 270 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 CFPP27918 469 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 MAPK1P28482 360 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 CDK8P49336 464 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 CLCN7P51798 805 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 NKG7Q16617 165 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 LRFN4Q6PJG9 635 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 TPTE2Q6XPS3 522 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 ARMCX6Q7L4S7 300 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 RIN3Q8TB24 985 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 ACSBG1Q96GR2 724 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 FAM84AQ96KN4 292 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 CEP44Q9C0F1 390 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 SRCIN1Q9C0H9 1055 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 PICK1Q9NRD5 415 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 GTF2IRD1Q9UHL9 959 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 MAPK8IP1Q9UQF2 711 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 ST14Q9Y5Y6 855 aa3.88□□□□□ -1.79
COMMD3-209ENST00000471350 LRRC10BA6NIK2 292 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 SUPT5HO00267 1087 aaKnown RBP3.87□□□□□ -1.79
COMMD3-209ENST00000471350 LRIG2O94898 1065 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 TSPAN15O95858 294 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 GSTT1P30711 240 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 CAP2P40123 477 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 ATP2B2Q01814 1243 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 IKZF1Q13422 519 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 SCARA3Q6AZY7 606 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.87□□□□□ -1.79
COMMD3-209ENST00000471350 HSPA12BQ96MM6 686 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 CBX8Q9HC52 389 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 ATP13A1Q9HD20 1204 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 LMCD1Q9NZU5 365 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 WWC3Q9ULE0 1092 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 PPM1HQ9ULR3 514 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 CAPN6Q9Y6Q1 641 aa3.87□□□□□ -1.79
COMMD3-209ENST00000471350 GIPC1O14908 333 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 GLI1P08151 1106 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 LRRC14Q15048 493 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 KCNMB1Q16558 191 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 MLANAQ16655 118 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 ALG1LQ6GMV1 187 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 LLGL2Q6P1M3 1020 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 PRR23BQ6ZRT6 265 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 CDC37L1Q7L3B6 337 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 KSR1Q8IVT5 923 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 FBF1Q8TES7 1133 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 PLPPR2Q96GM1 343 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 SP110Q9HB58 689 aa3.86□□□□□ -1.79
COMMD3-209ENST00000471350 PCNX4Q63HM2 1172 aa3.85□□□□□ -1.79
COMMD3-209ENST00000471350 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
COMMD3-209ENST00000471350 FOXQ1Q9C009 403 aa3.85□□□□□ -1.79
COMMD3-209ENST00000471350 WNT10AQ9GZT5 417 aa3.85□□□□□ -1.79
COMMD3-209ENST00000471350 CARS2Q9HA77 564 aaKnown RBP3.85□□□□□ -1.79
COMMD3-209ENST00000471350 KCNK12Q9HB15 430 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms