RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 TRIM10Q9UDY6 481 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 FPGT-TNNI3KV9GXZ4 949 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 ADAMTS13Q76LX8 1427 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 ABCC6O95255 1503 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 POLR2DO15514 142 aaKnown RBP10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 ZEB2O60315 1214 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 MRPS25P82663 173 aaKnown RBP10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 RPAINQ86UA6 219 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 PANX2Q96RD6 677 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 NRKQ7Z2Y5 1582 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 PRC1O43663 620 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 TUBB4BP68371 445 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 POSTNQ15063 836 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 EPHA10Q5JZY3 1008 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 TTC39AQ5SRH9 613 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 COG1Q8WTW3 980 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 PHKBQ93100 1093 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 CABS1Q96KC9 395 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 NUP88Q99567 741 aaPredicted RBP10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 KCNG1Q9UIX4 513 aa10.8□□□□□ -0.68
NHLRC3-203ENST00000470258 JCADQ9P266 1359 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 A1BGP04217 495 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 HSPD1P10809 573 aaKnown RBP10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 CDC25AP30304 524 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 TRDNQ13061 729 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 MSL3Q8N5Y2 521 aaKnown RBP10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 SERTAD1Q9UHV2 236 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 TFR2Q9UP52 801 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 PES1O00541 588 aaKnown RBP10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 MYO1BO43795 1136 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 TUBBP07437 444 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 MYL6BP14649 208 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 ATP1A2P50993 1020 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 FXR1P51114 621 aaKnown RBP eCLIP10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 TUBB2AQ13885 445 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 NR1I3Q14994 352 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 RALYLQ86SE5 291 aaKnown RBP10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 LINS1Q8NG48 757 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 MMS19Q96T76 1030 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 TUBB2BQ9BVA1 445 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 SELENOOQ9BVL4 669 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 HPSEQ9Y251 543 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 SBNO1A3KN83 1393 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 KDRP35968 1356 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 PEAK1Q9H792 1746 aa10.79□□□□□ -0.68
NHLRC3-203ENST00000470258 FRMD3A2A2Y4 597 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 KIF1CO43896 1103 aaKnown RBP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 ZNF18P17022 549 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 USP14P54578 494 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 WASHC4Q2M389 1173 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 FILIP1LQ4L180 1135 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 N4BP2L2Q92802 583 aaPredicted RBP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 OVOS2A0A0J9YW53 1432 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 OVOS2Q6IE36 1432 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 MFAP3LO75121 409 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 SSBP05455 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 MYBL2P10244 700 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 NF2P35240 595 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 AFMP43652 599 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 AARSP49588 968 aaKnown RBP eCLIP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 PDCLQ13371 301 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 RESP18Q5W5W9 173 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 KRT40Q6A162 431 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 WDR93Q6P2C0 686 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 SND1Q7KZF4 910 aaKnown RBP eCLIP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 RASGRP2Q7LDG7 609 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 CEP57Q86XR8 500 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 SMYD4Q8IYR2 804 aaPredicted RBP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 KBTBD3Q8NAB2 608 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 RUFY1Q96T51 708 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 VIPAS39Q9H9C1 493 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 EID1Q9Y6B2 187 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 MATR3P43243 847 aaKnown RBP eCLIP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 ACTN3Q08043 901 aaPredicted RBP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 TRIM29Q14134 588 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 ANKRD18AQ8IVF6 992 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 MLKLQ8NB16 471 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 ENOX1Q8TC92 643 aaKnown RBP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 NAA15Q9BXJ9 866 aaKnown RBP10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
NHLRC3-203ENST00000470258 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.68
NHLRC3-203ENST00000470258 CASP1P29466 404 aa10.77□□□□□ -0.68
NHLRC3-203ENST00000470258 GRIN1Q05586 938 aa10.77□□□□□ -0.68
NHLRC3-203ENST00000470258 PPFIA1Q13136 1202 aa10.77□□□□□ -0.68
NHLRC3-203ENST00000470258 KCTD16Q68DU8 428 aa10.77□□□□□ -0.68
NHLRC3-203ENST00000470258 GNL3LQ9NVN8 582 aaKnown RBP10.77□□□□□ -0.68
NHLRC3-203ENST00000470258 EIF3HO15372 352 aaKnown RBP eCLIP10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 DDX58O95786 925 aaKnown RBP10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 MCM3P25205 808 aa10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 NEXNQ0ZGT2 675 aa10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 MICU3Q86XE3 530 aa10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 CNGA4Q8IV77 575 aa10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 HAUS7Q99871 368 aa10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
NHLRC3-203ENST00000470258 PAG1Q9NWQ8 432 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms