RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 SUSD5O60279 629 aa6.33□□□□□ -1.4
GCFC2-205ENST00000470197 NLRP8Q86W28 1048 aa6.33□□□□□ -1.4
GCFC2-205ENST00000470197 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
GCFC2-205ENST00000470197 A0A1W2PQU0 124 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 ATE1O95260 518 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 HTR3BO95264 441 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 EPB42P16452 691 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 KIAA1211LQ6NV74 962 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 PKN3Q6P5Z2 889 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 DHX32Q7L7V1 743 aaKnown RBP6.32□□□□□ -1.4
GCFC2-205ENST00000470197 SULF2Q8IWU5 870 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 CBX8Q9HC52 389 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 TLR7Q9NYK1 1049 aaKnown RBP6.32□□□□□ -1.4
GCFC2-205ENST00000470197 TCEAL9Q9UHQ7 104 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 ROBO2Q9HCK4 1378 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 GFRA2O00451 464 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 POTEGQ6S5H5 508 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 LYSMD3Q7Z3D4 306 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 MTMR8Q96EF0 704 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 GPC6Q9Y625 555 aaPredicted RBP6.32□□□□□ -1.4
GCFC2-205ENST00000470197 ABCA10Q8WWZ4 1543 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 GABRDO14764 452 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 DNAJC8O75937 253 aaPredicted RBP6.32□□□□□ -1.4
GCFC2-205ENST00000470197 MYO1HQ8N1T3 1032 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 LEO1Q8WVC0 666 aaPredicted RBP6.32□□□□□ -1.4
GCFC2-205ENST00000470197 BHMTQ93088 406 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 GAS2L1Q99501 681 aaPredicted RBP6.32□□□□□ -1.4
GCFC2-205ENST00000470197 MTFR1LQ9H019 292 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 KCNH4Q9UQ05 1017 aa6.32□□□□□ -1.4
GCFC2-205ENST00000470197 MRPS23Q9Y3D9 190 aaKnown RBP6.32□□□□□ -1.4
GCFC2-205ENST00000470197 PDE2AO00408 941 aaPredicted RBP6.31□□□□□ -1.4
GCFC2-205ENST00000470197 BPNT1O95861 308 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 PPFIBP1Q86W92 1011 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 SKAP1Q86WV1 359 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 TMEM102Q8N9M5 508 aaPredicted RBP6.31□□□□□ -1.4
GCFC2-205ENST00000470197 ZSWIM2Q8NEG5 633 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 WDR89Q96FK6 387 aaPredicted RBP6.31□□□□□ -1.4
GCFC2-205ENST00000470197 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 NEK2P51955 445 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 SNIP1Q8TAD8 396 aaKnown RBP6.31□□□□□ -1.4
GCFC2-205ENST00000470197 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 HOOK2Q96ED9 719 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 PRDM2Q13029 1718 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 TNKSO95271 1327 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 PTPRGP23470 1445 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 B3GALT4O96024 378 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 CTSBP07858 339 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 CD33P20138 364 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 EPHB1P54762 984 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 CT47A1Q5JQC4 288 aaPredicted RBP6.31□□□□□ -1.4
GCFC2-205ENST00000470197 ZSCAN1Q8NBB4 408 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 SLC7A14Q8TBB6 771 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 TSEN34Q9BSV6 310 aaKnown RBP6.31□□□□□ -1.4
GCFC2-205ENST00000470197 TOR4AQ9NXH8 423 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 SUSD2Q9UGT4 822 aa6.31□□□□□ -1.4
GCFC2-205ENST00000470197 CLASP1Q7Z460 1538 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 RPL6Q02878 288 aaKnown RBP6.3□□□□□ -1.4
GCFC2-205ENST00000470197 PNMA5Q96PV4 448 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 VTA1Q9NP79 307 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 BLACEA4D250 179 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 GDF9O60383 454 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 CENPBP07199 599 aaPredicted RBP6.3□□□□□ -1.4
GCFC2-205ENST00000470197 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
GCFC2-205ENST00000470197 ATF3P18847 181 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 SF1Q15637 639 aaKnown RBP6.3□□□□□ -1.4
GCFC2-205ENST00000470197 LLGL2Q6P1M3 1020 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 EEPD1Q7L9B9 569 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 TPH2Q8IWU9 490 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 ATL2Q8NHH9 583 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 RHOBTB2Q9BYZ6 727 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 PTPRHQ9HD43 1115 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 NAGPAQ9UK23 515 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 SLC22A31A6NKX4 558 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 BNIP3LO60238 219 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 C6orf222P0C671 652 aaPredicted RBP6.3□□□□□ -1.4
GCFC2-205ENST00000470197 ITKQ08881 620 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 TDRD10Q5VZ19 366 aaKnown RBP6.3□□□□□ -1.4
GCFC2-205ENST00000470197 CCDC84Q86UT8 332 aaPredicted RBP6.3□□□□□ -1.4
GCFC2-205ENST00000470197 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 CDH19Q9H159 772 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
GCFC2-205ENST00000470197 BMP2P12643 396 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 LRFN4Q6PJG9 635 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
GCFC2-205ENST00000470197 IGFLR1Q9H665 355 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 REV1Q9UBZ9 1251 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 DNMT3LQ9UJW3 386 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 GJA3Q9Y6H8 435 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 C9IYK1 514 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 NME2P22392 152 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 SOX18P35713 384 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 RALBP1Q15311 655 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 SCLYQ96I15 445 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 PBX4Q9BYU1 374 aa6.29□□□□□ -1.4
GCFC2-205ENST00000470197 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
GCFC2-205ENST00000470197 TRIM39Q9HCM9 518 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms