RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 PI4KBQ9UBF8 816 aa20.67■□□□□ 0.9
PCCB-209ENST00000469217 SLURP2P0DP57 97 aa20.66■□□□□ 0.9
PCCB-209ENST00000469217 PRAMEF18Q5VWM3 479 aa20.66■□□□□ 0.9
PCCB-209ENST00000469217 KRT26Q7Z3Y9 468 aa20.66■□□□□ 0.9
PCCB-209ENST00000469217 INCENPQ9NQS7 918 aa20.66■□□□□ 0.9
PCCB-209ENST00000469217 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
PCCB-209ENST00000469217 ROBO3Q96MS0 1386 aa20.65■□□□□ 0.9
PCCB-209ENST00000469217 ADM5C9JUS6 153 aa20.65■□□□□ 0.9
PCCB-209ENST00000469217 TSGA10IPQ3SY00 556 aa20.65■□□□□ 0.9
PCCB-209ENST00000469217 STOX1Q6ZVD7 989 aa20.65■□□□□ 0.9
PCCB-209ENST00000469217 SERPINB13Q9UIV8 391 aa20.65■□□□□ 0.9
PCCB-209ENST00000469217 SIPA1L1O43166 1804 aa20.65■□□□□ 0.9
PCCB-209ENST00000469217 E7EWF7 191 aa20.64■□□□□ 0.9
PCCB-209ENST00000469217 GABPAQ06546 454 aa20.64■□□□□ 0.9
PCCB-209ENST00000469217 ADCK5Q3MIX3 580 aa20.64■□□□□ 0.9
PCCB-209ENST00000469217 AKNAD1Q5T1N1 836 aa20.64■□□□□ 0.9
PCCB-209ENST00000469217 DLK2Q6UY11 383 aa20.64■□□□□ 0.9
PCCB-209ENST00000469217 EHD4Q9H223 541 aa20.64■□□□□ 0.9
PCCB-209ENST00000469217 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.9
PCCB-209ENST00000469217 SLC3A2P08195 630 aaKnown RBP20.64■□□□□ 0.89
PCCB-209ENST00000469217 NBPF12Q5TAG4 269 aaPredicted RBP20.64■□□□□ 0.89
PCCB-209ENST00000469217 MAP1SQ66K74 1059 aaPredicted RBP20.64■□□□□ 0.89
PCCB-209ENST00000469217 LDHDQ86WU2 507 aa20.64■□□□□ 0.89
PCCB-209ENST00000469217 SLC44A5Q8NCS7 719 aa20.64■□□□□ 0.89
PCCB-209ENST00000469217 STAG1Q8WVM7 1258 aa20.64■□□□□ 0.89
PCCB-209ENST00000469217 ANAPC15P60006 121 aa20.63■□□□□ 0.89
PCCB-209ENST00000469217 MFSD6Q6ZSS7 791 aa20.63■□□□□ 0.89
PCCB-209ENST00000469217 C16orf86Q6ZW13 317 aa20.63■□□□□ 0.89
PCCB-209ENST00000469217 USP48Q86UV5 1035 aa20.63■□□□□ 0.89
PCCB-209ENST00000469217 FOXP4Q8IVH2 680 aaPredicted RBP20.63■□□□□ 0.89
PCCB-209ENST00000469217 GLIS2Q9BZE0 524 aaPredicted RBP20.63■□□□□ 0.89
PCCB-209ENST00000469217 DNAJC18Q9H819 358 aa20.63■□□□□ 0.89
PCCB-209ENST00000469217 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 PRDM1O75626 825 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 FGRP09769 529 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 CDC37L1Q7L3B6 337 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 METTL16Q86W50 562 aaKnown RBP20.62■□□□□ 0.89
PCCB-209ENST00000469217 CRACR2BQ8N4Y2 399 aaPredicted RBP20.62■□□□□ 0.89
PCCB-209ENST00000469217 KIF2CQ99661 725 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 NEDD4P46934 1319 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 YY1P25490 414 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 CDK8P49336 464 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 PDE4BQ07343 736 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 COL9A3Q14050 684 aaPredicted RBP20.62■□□□□ 0.89
PCCB-209ENST00000469217 MIGA2Q7L4E1 593 aa20.62■□□□□ 0.89
PCCB-209ENST00000469217 RNF41Q9H4P4 317 aaPredicted RBP20.62■□□□□ 0.89
PCCB-209ENST00000469217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
PCCB-209ENST00000469217 KRT32Q14532 448 aa20.61■□□□□ 0.89
PCCB-209ENST00000469217 NKX2-3Q8TAU0 364 aa20.61■□□□□ 0.89
PCCB-209ENST00000469217 IL17RAQ96F46 866 aa20.61■□□□□ 0.89
PCCB-209ENST00000469217 PCP11498 1178 aaKnown RBP20.6■□□□□ 0.89
PCCB-209ENST00000469217 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
PCCB-209ENST00000469217 MKNK2Q9HBH9 465 aa20.6■□□□□ 0.89
PCCB-209ENST00000469217 TOMM22Q9NS69 142 aa20.6■□□□□ 0.89
PCCB-209ENST00000469217 SWAP70Q9UH65 585 aa20.6■□□□□ 0.89
PCCB-209ENST00000469217 HERC5Q9UII4 1024 aaKnown RBP20.6■□□□□ 0.89
PCCB-209ENST00000469217 RRP12Q5JTH9 1297 aaKnown RBP20.6■□□□□ 0.89
PCCB-209ENST00000469217 NCOA7Q8NI08 942 aa20.6■□□□□ 0.89
PCCB-209ENST00000469217 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
PCCB-209ENST00000469217 TRIM34Q9BYJ4 488 aa20.6■□□□□ 0.89
PCCB-209ENST00000469217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.6■□□□□ 0.89
PCCB-209ENST00000469217 B4E1Z4 1266 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 KIF3CO14782 793 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 ORC4O43929 436 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 TBC1D12O60347 775 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 SHMT1P34896 483 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 MAP3K10Q02779 954 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 TRDNQ13061 729 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 CNNM2Q9H8M5 875 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 ZNF287Q9HBT7 754 aa20.59■□□□□ 0.89
PCCB-209ENST00000469217 SUPT20HL1Q3ZLR7 823 aa20.58■□□□□ 0.89
PCCB-209ENST00000469217 TATDN1Q6P1N9 297 aa20.58■□□□□ 0.89
PCCB-209ENST00000469217 CDCA5Q96FF9 252 aa20.58■□□□□ 0.89
PCCB-209ENST00000469217 SSC5DA1L4H1 1573 aa20.58■□□□□ 0.89
PCCB-209ENST00000469217 CPA1P15085 419 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 CASTP20810 708 aaKnown RBP20.57■□□□□ 0.88
PCCB-209ENST00000469217 RASA1P20936 1047 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 RALYLQ86SE5 291 aaKnown RBP20.57■□□□□ 0.88
PCCB-209ENST00000469217 KRT23Q9C075 422 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 TRAF5O00463 557 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 RANBP6O60518 1105 aaKnown RBP20.57■□□□□ 0.88
PCCB-209ENST00000469217 KDM4AO75164 1064 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 PSMA5P28066 241 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 CHADLQ6NUI6 762 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 MB21D2Q8IYB1 491 aaPredicted RBP20.57■□□□□ 0.88
PCCB-209ENST00000469217 ZNF444Q8N0Y2 327 aaPredicted RBP20.57■□□□□ 0.88
PCCB-209ENST00000469217 HOOK2Q96ED9 719 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 UPF3BQ9BZI7 483 aaKnown RBP20.57■□□□□ 0.88
PCCB-209ENST00000469217 TM6SF1Q9BZW5 370 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 FZD1Q9UP38 647 aa20.57■□□□□ 0.88
PCCB-209ENST00000469217 FMR1Q06787 632 aaKnown RBP eCLIP20.56■□□□□ 0.884e-13■■■■■ 26.9
PCCB-209ENST00000469217 FAM47AQ5JRC9 791 aa20.56■□□□□ 0.88
PCCB-209ENST00000469217 ZNF784Q8NCA9 323 aaPredicted RBP20.56■□□□□ 0.88
PCCB-209ENST00000469217 ESR2Q92731 530 aa20.56■□□□□ 0.88
PCCB-209ENST00000469217 ZSWIM6Q9HCJ5 1215 aa20.56■□□□□ 0.88
PCCB-209ENST00000469217 RRP1BQ14684 758 aaKnown RBP20.55■□□□□ 0.88
PCCB-209ENST00000469217 DCAF15Q66K64 600 aa20.55■□□□□ 0.88
PCCB-209ENST00000469217 BLOC1S2Q6QNY1 142 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms