RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 CETPP11597 493 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 PDE6AP16499 860 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 CYP7A1P22680 504 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 PPATQ06203 517 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 SNAPC2Q13487 334 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 PTPN18Q99952 460 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 R3HDMLQ9H3Y0 253 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 PICK1Q9NRD5 415 aa17.86■□□□□ 0.45
PCOLCE-204ENST00000468214 CCDC85CA6NKD9 419 aa17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 IRF6O14896 467 aa17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 CRHR2Q13324 411 aa17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 NOL9Q5SY16 702 aaKnown RBP17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 SLC9C2Q5TAH2 1124 aa17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 ATRNL1Q5VV63 1379 aa17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 TMED8Q6PL24 325 aaPredicted RBP17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 OSBPL5Q9H0X9 879 aaPredicted RBP17.85■□□□□ 0.45
PCOLCE-204ENST00000468214 DDX60LQ5H9U9 1706 aaKnown RBP17.84■□□□□ 0.45
PCOLCE-204ENST00000468214 TAF1CQ15572 869 aaPredicted RBP17.84■□□□□ 0.45
PCOLCE-204ENST00000468214 ADGRA1Q86SQ6 560 aa17.84■□□□□ 0.45
PCOLCE-204ENST00000468214 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
PCOLCE-204ENST00000468214 ZNF532Q9HCE3 1301 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 TRIM6-TRIM34B2RNG4 842 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 PPP4CP60510 307 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 ZSCAN25Q6NSZ9 544 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 SKAP1Q86WV1 359 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 SCYL3Q8IZE3 742 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 TGFBRAP1Q8WUH2 860 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 EVI5LQ96CN4 794 aa17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCOLCE-204ENST00000468214 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 PHF20L1A8MW92 1017 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 SLURP2P0DP57 97 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 ADD2P35612 726 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 LRRFIP1Q32MZ4 808 aaKnown RBP17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 TTC22Q5TAA0 569 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 MAPKAPK5Q8IW41 473 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 FAM43AQ8N2R8 423 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 MIGA1Q8NAN2 632 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 ZFYVE28Q9HCC9 887 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 SIPA1L1O43166 1804 aa17.82■□□□□ 0.44
PCOLCE-204ENST00000468214 FLT1P17948 1338 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 TCRBV5S4A2TA0A5A2 114 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 FAM196BA6NMK8 535 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 BTBD19C9JJ37 291 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 TBC1D12O60347 775 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 CTNND1O60716 968 aaKnown RBP17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 DYNLL1P63167 89 aaKnown RBP17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 MAP3K10Q02779 954 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 PKN2Q16513 984 aaKnown RBP17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 CERS3Q8IU89 383 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 RILPL2Q969X0 211 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 TRIM34Q9BYJ4 488 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 ATAD5Q96QE3 1844 aa17.81■□□□□ 0.44
PCOLCE-204ENST00000468214 CHGBP05060 677 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 ZFYP08048 801 aaPredicted RBP17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 UBE3CQ15386 1083 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 ERO1AQ96HE7 468 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 PI4KBQ9UBF8 816 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 ZHX2Q9Y6X8 837 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 DOCK1Q14185 1865 aa17.8■□□□□ 0.44
PCOLCE-204ENST00000468214 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 SLC34A2O95436 690 aa17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 GSPT1P15170 499 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 PTPRAP18433 802 aa17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 USP5P45974 858 aa17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 SAP30BPQ9UHR5 308 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 HERC5Q9UII4 1024 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-204ENST00000468214 CXCL11O14625 94 aa17.78■□□□□ 0.44
PCOLCE-204ENST00000468214 HLA-DOAP06340 250 aa17.78■□□□□ 0.44
PCOLCE-204ENST00000468214 SP3Q02447 781 aa17.78■□□□□ 0.44
PCOLCE-204ENST00000468214 CRACR2BQ8N4Y2 399 aaPredicted RBP17.78■□□□□ 0.44
PCOLCE-204ENST00000468214 APPBP2Q92624 585 aa17.78■□□□□ 0.44
PCOLCE-204ENST00000468214 PALD1Q9ULE6 856 aa17.78■□□□□ 0.44
PCOLCE-204ENST00000468214 TRIM17Q9Y577 477 aa17.78■□□□□ 0.44
PCOLCE-204ENST00000468214 MBD4O95243 580 aa17.77■□□□□ 0.44
PCOLCE-204ENST00000468214 SLC4A8Q2Y0W8 1093 aa17.77■□□□□ 0.44
PCOLCE-204ENST00000468214 ANKRD23Q86SG2 305 aa17.77■□□□□ 0.44
PCOLCE-204ENST00000468214 CD99L2Q8TCZ2 262 aa17.77■□□□□ 0.44
PCOLCE-204ENST00000468214 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.44
PCOLCE-204ENST00000468214 TRIM75PA6NK02 468 aa17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 PDHXO00330 501 aa17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 SDSP20132 328 aa17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 FBXO46Q6PJ61 603 aaPredicted RBP17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 GADL1Q6ZQY3 521 aa17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 CCDC84Q86UT8 332 aaPredicted RBP17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 LAMA4Q16363 1823 aa17.76■□□□□ 0.43
PCOLCE-204ENST00000468214 TLR2O60603 784 aa17.75■□□□□ 0.43
PCOLCE-204ENST00000468214 CAP2P40123 477 aa17.75■□□□□ 0.43
PCOLCE-204ENST00000468214 ZMYM1Q5SVZ6 1142 aa17.75■□□□□ 0.43
PCOLCE-204ENST00000468214 FASTKD5Q7L8L6 764 aaKnown RBP17.75■□□□□ 0.43
PCOLCE-204ENST00000468214 OTOP1Q7RTM1 612 aa17.75■□□□□ 0.43
PCOLCE-204ENST00000468214 TICAM2Q86XR7 235 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms