RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 LLGL2Q6P1M3 1020 aa6.48□□□□□ -1.37
CCDC58-203ENST00000466854 C12orf40Q86WS4 652 aa6.48□□□□□ -1.37
CCDC58-203ENST00000466854 HRASLS5Q96KN8 279 aa6.48□□□□□ -1.37
CCDC58-203ENST00000466854 TRAIPQ9BWF2 469 aa6.48□□□□□ -1.37
CCDC58-203ENST00000466854 TMEM265A0A087WTH1 108 aa6.47□□□□□ -1.37
CCDC58-203ENST00000466854 ALG1LQ6GMV1 187 aa6.47□□□□□ -1.37
CCDC58-203ENST00000466854 ZSCAN29Q8IWY8 852 aaPredicted RBP6.47□□□□□ -1.37
CCDC58-203ENST00000466854 LRRN4CLQ8ND94 238 aa6.47□□□□□ -1.37
CCDC58-203ENST00000466854 RC3H2Q9HBD1 1191 aaKnown RBP6.47□□□□□ -1.37
CCDC58-203ENST00000466854 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
CCDC58-203ENST00000466854 SAMM50Q9Y512 469 aa6.47□□□□□ -1.37
CCDC58-203ENST00000466854 GIPC1O14908 333 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 FANCGO15287 622 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 P4HBP07237 508 aaKnown RBP6.46□□□□□ -1.38
CCDC58-203ENST00000466854 C8AP07357 584 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 PTPN11Q06124 597 aaPredicted RBP6.46□□□□□ -1.38
CCDC58-203ENST00000466854 PCNX4Q63HM2 1172 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 ARHGAP27Q6ZUM4 889 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 ATG4DQ86TL0 474 aaPredicted RBP6.46□□□□□ -1.38
CCDC58-203ENST00000466854 SPACA3Q8IXA5 215 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 C12orf49Q9H741 205 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 PCDHA4Q9UN74 947 aa6.46□□□□□ -1.38
CCDC58-203ENST00000466854 IGF2BP3O00425 579 aaKnown RBP eCLIP6.45□□□□□ -1.38
CCDC58-203ENST00000466854 EOMESO95936 686 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 USP17L7P0C7H9 530 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 JAG1P78504 1218 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 KCNA1Q09470 495 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 INPP5AQ14642 412 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 NKPD1Q17RQ9 610 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 FAM8A1Q9UBU6 413 aa6.45□□□□□ -1.38
CCDC58-203ENST00000466854 BIN1O00499 593 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 LRRC14Q15048 493 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 ANGEL2Q5VTE6 544 aaKnown RBP6.44□□□□□ -1.38
CCDC58-203ENST00000466854 LRFN4Q6PJG9 635 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 ARMCX6Q7L4S7 300 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 PI4K2BQ8TCG2 481 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 PRDM7Q9NQW5 492 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 PICK1Q9NRD5 415 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 CYP8B1Q9UNU6 501 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 SPG7Q9UQ90 795 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 SNX11Q9Y5W9 270 aa6.44□□□□□ -1.38
CCDC58-203ENST00000466854 ATP2B2Q01814 1243 aa6.43□□□□□ -1.38
CCDC58-203ENST00000466854 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
CCDC58-203ENST00000466854 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
CCDC58-203ENST00000466854 PATL2C9JE40 543 aaKnown RBP6.42□□□□□ -1.38
CCDC58-203ENST00000466854 CDK8P49336 464 aa6.42□□□□□ -1.38
CCDC58-203ENST00000466854 ZNF648Q5T619 568 aaPredicted RBP6.42□□□□□ -1.38
CCDC58-203ENST00000466854 SLC23A3Q6PIS1 610 aa6.42□□□□□ -1.38
CCDC58-203ENST00000466854 CYFIP1Q7L576 1253 aa6.42□□□□□ -1.38
CCDC58-203ENST00000466854 FAM168AQ92567 244 aa6.42□□□□□ -1.38
CCDC58-203ENST00000466854 ELMO3Q96BJ8 720 aa6.42□□□□□ -1.38
CCDC58-203ENST00000466854 PLPPR2Q96GM1 343 aa6.42□□□□□ -1.38
CCDC58-203ENST00000466854 CNTNAP4Q9C0A0 1308 aa6.42□□□□□ -1.38
CCDC58-203ENST00000466854 PRAMEF27A3QJZ7 478 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 LRIG2O94898 1065 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 SLITRK5O94991 958 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 LDHBP07195 334 aaKnown RBP6.41□□□□□ -1.38
CCDC58-203ENST00000466854 SLBPQ14493 270 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC58-203ENST00000466854 NKG7Q16617 165 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 SV2BQ7L1I2 683 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 CDC37L1Q7L3B6 337 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 KCT2Q8NC54 265 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 ASB11Q8WXH4 323 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 PITPNM2Q9BZ72 1349 aa6.41□□□□□ -1.38
CCDC58-203ENST00000466854 PRR33A8MZF0 331 aa6.4□□□□□ -1.38
CCDC58-203ENST00000466854 RBAK-RBAKDNI3L0D1 243 aa6.4□□□□□ -1.38
CCDC58-203ENST00000466854 CLCN7P51798 805 aa6.4□□□□□ -1.38
CCDC58-203ENST00000466854 IKZF1Q13422 519 aa6.4□□□□□ -1.38
CCDC58-203ENST00000466854 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
CCDC58-203ENST00000466854 ZNF507Q8TCN5 953 aa6.4□□□□□ -1.38
CCDC58-203ENST00000466854 PRDM5Q9NQX1 630 aaPredicted RBP6.4□□□□□ -1.38
CCDC58-203ENST00000466854 RNF19AQ9NV58 838 aa6.4□□□□□ -1.38
CCDC58-203ENST00000466854 TTF2Q9UNY4 1162 aaKnown RBP6.4□□□□□ -1.38
CCDC58-203ENST00000466854 GNAT3A8MTJ3 354 aa6.39□□□□□ -1.39
CCDC58-203ENST00000466854 CAP2P40123 477 aa6.39□□□□□ -1.39
CCDC58-203ENST00000466854 ZP2Q05996 745 aa6.39□□□□□ -1.39
CCDC58-203ENST00000466854 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
CCDC58-203ENST00000466854 TTBK2Q6IQ55 1244 aa6.39□□□□□ -1.39
CCDC58-203ENST00000466854 FOXQ1Q9C009 403 aa6.39□□□□□ -1.39
CCDC58-203ENST00000466854 WNT10AQ9GZT5 417 aa6.39□□□□□ -1.39
CCDC58-203ENST00000466854 GNA15P30679 374 aa6.38□□□□□ -1.39
CCDC58-203ENST00000466854 C22orf34Q6ZV56 151 aa6.38□□□□□ -1.39
CCDC58-203ENST00000466854 HDXQ7Z353 690 aa6.38□□□□□ -1.39
CCDC58-203ENST00000466854 TMEM40Q8WWA1 233 aa6.38□□□□□ -1.39
CCDC58-203ENST00000466854 FRMD6Q96NE9 622 aa6.38□□□□□ -1.39
CCDC58-203ENST00000466854 MIPEPQ99797 713 aa6.38□□□□□ -1.39
CCDC58-203ENST00000466854 SEMA3GQ9NS98 782 aa6.38□□□□□ -1.39
CCDC58-203ENST00000466854 ZNF865P0CJ78 1059 aaPredicted RBP6.37□□□□□ -1.39
CCDC58-203ENST00000466854 ZNF124Q15973 351 aa6.37□□□□□ -1.39
CCDC58-203ENST00000466854 RIN3Q8TB24 985 aa6.37□□□□□ -1.39
CCDC58-203ENST00000466854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.37□□□□□ -1.39
CCDC58-203ENST00000466854 CTNND2Q9UQB3 1225 aa6.37□□□□□ -1.39
CCDC58-203ENST00000466854 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
CCDC58-203ENST00000466854 SNCAIPQ9Y6H5 919 aa6.37□□□□□ -1.39
CCDC58-203ENST00000466854 PRPF40AO75400 957 aaKnown RBP6.36□□□□□ -1.39
CCDC58-203ENST00000466854 EIF4BP23588 611 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms