RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 RTP1P59025 263 aa19.02■□□□□ 0.64
NCSTN-210ENST00000465223 MAP3K10Q02779 954 aa19.02■□□□□ 0.64
NCSTN-210ENST00000465223 VGLL2Q8N8G2 317 aa19.02■□□□□ 0.64
NCSTN-210ENST00000465223 CACNA1FO60840 1977 aa19.02■□□□□ 0.64
NCSTN-210ENST00000465223 CDH23Q9H251 3354 aa19.02■□□□□ 0.63
NCSTN-210ENST00000465223 PDE8BO95263 885 aa19.01■□□□□ 0.63
NCSTN-210ENST00000465223 XRCC5P13010 732 aaKnown RBP19.01■□□□□ 0.63
NCSTN-210ENST00000465223 ZEB1P37275 1124 aaPredicted RBP19.01■□□□□ 0.63
NCSTN-210ENST00000465223 HMGCS2P54868 508 aa19.01■□□□□ 0.63
NCSTN-210ENST00000465223 SPP2Q13103 211 aa19.01■□□□□ 0.63
NCSTN-210ENST00000465223 KAZALD1Q96I82 304 aa19.01■□□□□ 0.63
NCSTN-210ENST00000465223 SUCLG2Q96I99 432 aa19.01■□□□□ 0.63
NCSTN-210ENST00000465223 MORF4L1Q9UBU8 362 aa19.01■□□□□ 0.63
NCSTN-210ENST00000465223 ATAD5Q96QE3 1844 aa19■□□□□ 0.63
NCSTN-210ENST00000465223 GRIN2CQ14957 1233 aa19■□□□□ 0.63
NCSTN-210ENST00000465223 WDR66Q8TBY9 1149 aa19■□□□□ 0.63
NCSTN-210ENST00000465223 BADQ92934 168 aa19■□□□□ 0.63
NCSTN-210ENST00000465223 C9orf78Q9NZ63 289 aaPredicted RBP19■□□□□ 0.63
NCSTN-210ENST00000465223 DNAH12Q6ZR08 3092 aa19■□□□□ 0.63
NCSTN-210ENST00000465223 MYH2Q9UKX2 1941 aa19■□□□□ 0.63
NCSTN-210ENST00000465223 FAM196BA6NMK8 535 aa18.99■□□□□ 0.63
NCSTN-210ENST00000465223 ENTPD3O75355 529 aa18.99■□□□□ 0.63
NCSTN-210ENST00000465223 SOCS4Q8WXH5 440 aa18.99■□□□□ 0.63
NCSTN-210ENST00000465223 TXNRD2Q9NNW7 524 aa18.99■□□□□ 0.63
NCSTN-210ENST00000465223 PRDM5Q9NQX1 630 aaPredicted RBP18.99■□□□□ 0.63
NCSTN-210ENST00000465223 ATP11BQ9Y2G3 1177 aa18.99■□□□□ 0.63
NCSTN-210ENST00000465223 RLFQ13129 1914 aa18.98■□□□□ 0.63
NCSTN-210ENST00000465223 PABPC4Q13310 644 aaKnown RBP eCLIP18.98■□□□□ 0.63
NCSTN-210ENST00000465223 TRMT44Q8IYL2 757 aaKnown RBP18.98■□□□□ 0.63
NCSTN-210ENST00000465223 PPM1EQ8WY54 764 aa18.98■□□□□ 0.63
NCSTN-210ENST00000465223 USP6NLQ92738 828 aa18.98■□□□□ 0.63
NCSTN-210ENST00000465223 IDI2Q9BXS1 227 aa18.98■□□□□ 0.63
NCSTN-210ENST00000465223 DDX4Q9NQI0 724 aaKnown RBP18.98■□□□□ 0.63
NCSTN-210ENST00000465223 RFX7Q2KHR2 1363 aa18.97■□□□□ 0.63
NCSTN-210ENST00000465223 ZNF280CQ8ND82 737 aa18.97■□□□□ 0.63
NCSTN-210ENST00000465223 KLHDC4Q8TBB5 520 aa18.97■□□□□ 0.63
NCSTN-210ENST00000465223 ADAMTS19Q8TE59 1207 aa18.97■□□□□ 0.63
NCSTN-210ENST00000465223 LDHBP07195 334 aaKnown RBP18.96■□□□□ 0.63
NCSTN-210ENST00000465223 IFIT1P09914 478 aaKnown RBP18.96■□□□□ 0.63
NCSTN-210ENST00000465223 FGFR2P21802 821 aa18.96■□□□□ 0.63
NCSTN-210ENST00000465223 PICALMQ13492 652 aa18.96■□□□□ 0.63
NCSTN-210ENST00000465223 PDE3AQ14432 1141 aa18.96■□□□□ 0.63
NCSTN-210ENST00000465223 P2RX7Q99572 595 aaKnown RBP18.96■□□□□ 0.63
NCSTN-210ENST00000465223 RGS2P41220 211 aa18.95■□□□□ 0.62
NCSTN-210ENST00000465223 Q3C1V9 767 aa18.95■□□□□ 0.62
NCSTN-210ENST00000465223 SH3RF1Q7Z6J0 888 aa18.95■□□□□ 0.62
NCSTN-210ENST00000465223 GPRC5AQ8NFJ5 357 aa18.95■□□□□ 0.62
NCSTN-210ENST00000465223 PORCNQ9H237 461 aa18.95■□□□□ 0.62
NCSTN-210ENST00000465223 IRX3P78415 501 aaPredicted RBP18.94■□□□□ 0.62
NCSTN-210ENST00000465223 MORN1Q5T089 497 aa18.94■□□□□ 0.62
NCSTN-210ENST00000465223 GPR142Q7Z601 462 aa18.94■□□□□ 0.62
NCSTN-210ENST00000465223 ATXN2LQ8WWM7 1075 aaKnown RBP18.94■□□□□ 0.62
NCSTN-210ENST00000465223 ASB2Q96Q27 587 aa18.94■□□□□ 0.62
NCSTN-210ENST00000465223 UHRF1Q96T88 793 aaPredicted RBP18.94■□□□□ 0.62
NCSTN-210ENST00000465223 APBA2Q99767 749 aa18.94■□□□□ 0.62
NCSTN-210ENST00000465223 RNF216Q9NWF9 866 aaPredicted RBP18.94■□□□□ 0.62
NCSTN-210ENST00000465223 DDX20Q9UHI6 824 aaKnown RBP18.94■□□□□ 0.62
NCSTN-210ENST00000465223 KIF16BQ96L93 1317 aa18.94■□□□□ 0.62
NCSTN-210ENST00000465223 NBPF7P0C2Y1 421 aaPredicted RBP18.93■□□□□ 0.62
NCSTN-210ENST00000465223 RRP1BQ14684 758 aaKnown RBP18.93■□□□□ 0.62
NCSTN-210ENST00000465223 PUM3Q15397 648 aaKnown RBP18.93■□□□□ 0.62
NCSTN-210ENST00000465223 SH3D19Q5HYK7 790 aa18.93■□□□□ 0.62
NCSTN-210ENST00000465223 SLC39A5Q6ZMH5 540 aa18.93■□□□□ 0.62
NCSTN-210ENST00000465223 RNPC3Q96LT9 517 aaKnown RBP18.93■□□□□ 0.62
NCSTN-210ENST00000465223 BICC1Q9H694 974 aaKnown RBP18.93■□□□□ 0.62
NCSTN-210ENST00000465223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.93■□□□□ 0.62
NCSTN-210ENST00000465223 FLRT1Q9NZU1 646 aa18.93■□□□□ 0.62
NCSTN-210ENST00000465223 TRIM43BA6NCK2 446 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 DNM1LO00429 736 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 CNGA1P29973 690 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 MAPK4P31152 587 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 EPHB4P54760 987 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 HERVK_113P62684 666 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 TRIM60Q495X7 471 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
NCSTN-210ENST00000465223 LPAR1Q92633 364 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 TRIM43Q96BQ3 446 aaPredicted RBP18.92■□□□□ 0.62
NCSTN-210ENST00000465223 OSBPL5Q9H0X9 879 aaPredicted RBP18.92■□□□□ 0.62
NCSTN-210ENST00000465223 PDLIM7Q9NR12 457 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 THEGQ9P2T0 379 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 RBPJLQ9UBG7 517 aa18.92■□□□□ 0.62
NCSTN-210ENST00000465223 TCF20Q9UGU0 1960 aaKnown RBP18.92■□□□□ 0.62
NCSTN-210ENST00000465223 PLEKHH3Q7Z736 793 aa18.91■□□□□ 0.62
NCSTN-210ENST00000465223 ANKRD44Q8N8A2 993 aa18.91■□□□□ 0.62
NCSTN-210ENST00000465223 GAKO14976 1311 aa18.91■□□□□ 0.62
NCSTN-210ENST00000465223 USP17L5A8MUK1 530 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 TBC1D12O60347 775 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 VAMP4O75379 141 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 ALDH1L1O75891 902 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 SLC5A1P13866 664 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 DNAJB2P25686 324 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 ERVK-9P63128 1117 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 ERVK-24P63145 666 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 MTMR2Q13614 643 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 POTEEQ6S8J3 1075 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 CCAR1Q8IX12 1150 aaKnown RBP18.9■□□□□ 0.62
NCSTN-210ENST00000465223 NECAB3Q96P71 396 aaPredicted RBP18.9■□□□□ 0.62
NCSTN-210ENST00000465223 PAGR1Q9BTK6 254 aa18.9■□□□□ 0.62
NCSTN-210ENST00000465223 ZNF576Q9H609 170 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms