RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 MCAMP43121 646 aa13.54□□□□□ -0.24
COL11A1-207ENST00000465209 FAM110CQ1W6H9 321 aa13.54□□□□□ -0.24
COL11A1-207ENST00000465209 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-207ENST00000465209 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
COL11A1-207ENST00000465209 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-207ENST00000465209 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
COL11A1-207ENST00000465209 OSBPL5Q9H0X9 879 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-207ENST00000465209 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
COL11A1-207ENST00000465209 AKAP2Q9Y2D5 859 aa13.54□□□□□ -0.24
COL11A1-207ENST00000465209 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 TNPO2O14787 897 aaKnown RBP13.53□□□□□ -0.24
COL11A1-207ENST00000465209 MAP4K4O95819 1239 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-207ENST00000465209 GNAI3P08754 354 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 TBC1D9Q6ZT07 1266 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 ANKRD13CQ8N6S4 541 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 SPATA5Q8NB90 893 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 SMCR8Q8TEV9 937 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-207ENST00000465209 DPF3Q92784 378 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 HTATIP2Q9BUP3 242 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 DNAH12Q6ZR08 3092 aa13.53□□□□□ -0.24
COL11A1-207ENST00000465209 DDX60LQ5H9U9 1706 aaKnown RBP13.53□□□□□ -0.24
COL11A1-207ENST00000465209 ZBTB7BO15156 539 aaPredicted RBP13.52□□□□□ -0.25
COL11A1-207ENST00000465209 TRIM27P14373 513 aa13.52□□□□□ -0.25
COL11A1-207ENST00000465209 SH3D19Q5HYK7 790 aa13.52□□□□□ -0.25
COL11A1-207ENST00000465209 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.25
COL11A1-207ENST00000465209 DNAJC18Q9H819 358 aa13.52□□□□□ -0.25
COL11A1-207ENST00000465209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.52□□□□□ -0.25
COL11A1-207ENST00000465209 BIN2Q9UBW5 565 aaPredicted RBP13.52□□□□□ -0.25
COL11A1-207ENST00000465209 LAMA2P24043 3122 aaKnown RBP13.52□□□□□ -0.25
COL11A1-207ENST00000465209 CAP2P40123 477 aa13.51□□□□□ -0.25
COL11A1-207ENST00000465209 SPP2Q13103 211 aa13.51□□□□□ -0.25
COL11A1-207ENST00000465209 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
COL11A1-207ENST00000465209 GJD2Q9UKL4 321 aa13.51□□□□□ -0.25
COL11A1-207ENST00000465209 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
COL11A1-207ENST00000465209 FRMPD3Q5JV73 1810 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 A0A0C4DFX4 3053 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 CAPN2P17655 700 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
COL11A1-207ENST00000465209 HMGCS2P54868 508 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 GSTO1P78417 241 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 JAG1P78504 1218 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
COL11A1-207ENST00000465209 SH3RF3Q8TEJ3 882 aaPredicted RBP13.5□□□□□ -0.25
COL11A1-207ENST00000465209 NEUROD6Q96NK8 337 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 DEFB118Q96PH6 123 aa13.5□□□□□ -0.25
COL11A1-207ENST00000465209 ASCC2Q9H1I8 757 aaPredicted RBP13.5□□□□□ -0.25
COL11A1-207ENST00000465209 MYH1P12882 1939 aa13.49□□□□□ -0.25
COL11A1-207ENST00000465209 LDHCP07864 332 aa13.49□□□□□ -0.25
COL11A1-207ENST00000465209 GCLCP48506 637 aaPredicted RBP13.49□□□□□ -0.25
COL11A1-207ENST00000465209 SHROOM1Q2M3G4 852 aaPredicted RBP13.49□□□□□ -0.25
COL11A1-207ENST00000465209 ADGRA1Q86SQ6 560 aa13.49□□□□□ -0.25
COL11A1-207ENST00000465209 DIS3LQ8TF46 1054 aaKnown RBP13.49□□□□□ -0.25
COL11A1-207ENST00000465209 COA7Q96BR5 231 aa13.49□□□□□ -0.25
COL11A1-207ENST00000465209 MORF4L1Q9UBU8 362 aa13.49□□□□□ -0.25
COL11A1-207ENST00000465209 HERC5Q9UII4 1024 aaKnown RBP13.49□□□□□ -0.25
COL11A1-207ENST00000465209 FLT1P17948 1338 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 GNAI2P04899 355 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 TRIM32Q13049 653 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 POLA2Q14181 598 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 ATF7IPQ6VMQ6 1270 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 WDR18Q9BV38 432 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL11A1-207ENST00000465209 RAI14Q9P0K7 980 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 NR2E3Q9Y5X4 410 aa13.48□□□□□ -0.25
COL11A1-207ENST00000465209 UNC80Q8N2C7 3258 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 A0A1W2PPC1 479 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 SOX1O00570 391 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-207ENST00000465209 BCAR3O75815 825 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 HMGCRP04035 888 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-207ENST00000465209 UQCRFS1P1P0C7P4 283 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 PPP4CP60510 307 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 MAP3K21Q5TCX8 1036 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 PAWRQ96IZ0 340 aaKnown RBP13.47□□□□□ -0.25
COL11A1-207ENST00000465209 TXNRD2Q9NNW7 524 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL11A1-207ENST00000465209 PI4KBQ9UBF8 816 aa13.47□□□□□ -0.25
COL11A1-207ENST00000465209 PEX10O60683 326 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 TFRCP02786 760 aaKnown RBP13.46□□□□□ -0.25
COL11A1-207ENST00000465209 HOXA7P31268 230 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-207ENST00000465209 BACE1P56817 501 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 PABPC4Q13310 644 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL11A1-207ENST00000465209 MTMR2Q13614 643 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 TNNI3KQ59H18 835 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 SSH3Q8TE77 659 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 TRIB2Q92519 343 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 DHX36Q9H2U1 1008 aaKnown RBP13.46□□□□□ -0.25
COL11A1-207ENST00000465209 FPGT-TNNI3KV9GXZ4 949 aa13.46□□□□□ -0.25
COL11A1-207ENST00000465209 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
COL11A1-207ENST00000465209 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
COL11A1-207ENST00000465209 EVI5O60447 810 aa13.45□□□□□ -0.26
COL11A1-207ENST00000465209 G3BP1Q13283 466 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL11A1-207ENST00000465209 GORABQ5T7V8 394 aa13.45□□□□□ -0.26
COL11A1-207ENST00000465209 NAA16Q6N069 864 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms