RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 NAA16Q6N069 864 aaPredicted RBP11.59□□□□□ -0.55
PTPN18-209ENST00000464576 FTSJ3Q8IY81 847 aaKnown RBP11.59□□□□□ -0.55
PTPN18-209ENST00000464576 CRACR2BQ8N4Y2 399 aaPredicted RBP11.59□□□□□ -0.55
PTPN18-209ENST00000464576 ANKRD13CQ8N6S4 541 aa11.59□□□□□ -0.55
PTPN18-209ENST00000464576 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
PTPN18-209ENST00000464576 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
PTPN18-209ENST00000464576 NSUN4Q96CB9 384 aaKnown RBP11.59□□□□□ -0.55
PTPN18-209ENST00000464576 HERC5Q9UII4 1024 aaKnown RBP11.59□□□□□ -0.55
PTPN18-209ENST00000464576 GABRQQ9UN88 632 aa11.59□□□□□ -0.55
PTPN18-209ENST00000464576 ATRNL1Q5VV63 1379 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 FARP2O94887 1054 aaPredicted RBP11.58□□□□□ -0.56
PTPN18-209ENST00000464576 TRIM27P14373 513 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 ELNP15502 786 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 CAPN2P17655 700 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
PTPN18-209ENST00000464576 GCLCP48506 637 aaPredicted RBP11.58□□□□□ -0.56
PTPN18-209ENST00000464576 RHBDL3P58872 404 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 PI16Q6UXB8 463 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
PTPN18-209ENST00000464576 PXYLP1Q8TE99 480 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 U2AF1L4Q8WU68 220 aaKnown RBP11.58□□□□□ -0.56
PTPN18-209ENST00000464576 DHX36Q9H2U1 1008 aaKnown RBP11.58□□□□□ -0.56
PTPN18-209ENST00000464576 TMOD4Q9NZQ9 345 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 PI4KBQ9UBF8 816 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 PHIPQ8WWQ0 1821 aa11.58□□□□□ -0.56
PTPN18-209ENST00000464576 BCAR3O75815 825 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 SGPL1O95470 568 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 INHAP05111 366 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 CAP2P40123 477 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 HMGCS2P54868 508 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 IRX3P78415 501 aaPredicted RBP11.57□□□□□ -0.56
PTPN18-209ENST00000464576 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
PTPN18-209ENST00000464576 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
PTPN18-209ENST00000464576 AATFQ9NY61 560 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTPN18-209ENST00000464576 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 PNMA6EA0A0J9YXQ4 647 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 EVI5O60447 810 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
PTPN18-209ENST00000464576 HLA-DOAP06340 250 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 ASNSP08243 561 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 SLURP2P0DP57 97 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 MCAMP43121 646 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 IRF5Q13568 498 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 FAM110CQ1W6H9 321 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 TREML2Q5T2D2 321 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 DOCK3Q8IZD9 2030 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 SH3RF3Q8TEJ3 882 aaPredicted RBP11.56□□□□□ -0.56
PTPN18-209ENST00000464576 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
PTPN18-209ENST00000464576 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
PTPN18-209ENST00000464576 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.56□□□□□ -0.56
PTPN18-209ENST00000464576 FXR1P51114 621 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPN18-209ENST00000464576 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
PTPN18-209ENST00000464576 MAPKAPK5Q8IW41 473 aa11.55□□□□□ -0.56
PTPN18-209ENST00000464576 TGFBRAP1Q8WUH2 860 aa11.55□□□□□ -0.56
PTPN18-209ENST00000464576 GPR108Q9NPR9 543 aa11.55□□□□□ -0.56
PTPN18-209ENST00000464576 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
PTPN18-209ENST00000464576 COL2A1P02458 1487 aaPredicted RBP11.55□□□□□ -0.56
PTPN18-209ENST00000464576 MTMR2Q13614 643 aa11.54□□□□□ -0.56
PTPN18-209ENST00000464576 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
PTPN18-209ENST00000464576 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
PTPN18-209ENST00000464576 TMEM57Q8N5G2 664 aa11.54□□□□□ -0.56
PTPN18-209ENST00000464576 ZNF384Q8TF68 577 aa11.54□□□□□ -0.56
PTPN18-209ENST00000464576 ASCC2Q9H1I8 757 aaPredicted RBP11.54□□□□□ -0.56
PTPN18-209ENST00000464576 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.54□□□□□ -0.56
PTPN18-209ENST00000464576 RANBP2P49792 3224 aaKnown RBP11.54□□□□□ -0.56
PTPN18-209ENST00000464576 C19orf81C9J6K1 198 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 IGSF3O75054 1194 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 IDH1O75874 414 aaKnown RBP11.53□□□□□ -0.56
PTPN18-209ENST00000464576 HMGCRP04035 888 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 USP5P45974 858 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 BACE1P56817 501 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 ATP8B2P98198 1209 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 PDE3AQ14432 1141 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 NECAB2Q7Z6G3 386 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 CERS3Q8IU89 383 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 DBNDD2Q9BQY9 259 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 WDR18Q9BV38 432 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
PTPN18-209ENST00000464576 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 SAP30BPQ9UHR5 308 aaKnown RBP11.53□□□□□ -0.56
PTPN18-209ENST00000464576 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 LOC285556D6RIA3 1793 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
PTPN18-209ENST00000464576 CYP2E1P05181 493 aaPredicted RBP11.52□□□□□ -0.57
PTPN18-209ENST00000464576 CYP7A1P22680 504 aa11.52□□□□□ -0.57
PTPN18-209ENST00000464576 PPP4CP60510 307 aa11.52□□□□□ -0.57
PTPN18-209ENST00000464576 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTPN18-209ENST00000464576 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
PTPN18-209ENST00000464576 GPRC5AQ8NFJ5 357 aa11.52□□□□□ -0.57
PTPN18-209ENST00000464576 FEZ1Q99689 392 aa11.52□□□□□ -0.57
PTPN18-209ENST00000464576 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTPN18-209ENST00000464576 C1orf115Q9H7X2 142 aa11.52□□□□□ -0.57
PTPN18-209ENST00000464576 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms