RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 TBX22Q9Y458 520 aa8□□□□□ -1.13
CD46-211ENST00000464082 SPATA31E1Q6ZUB1 1445 aa8□□□□□ -1.13
CD46-211ENST00000464082 PIK3R4Q99570 1358 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 TOM1O60784 492 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 HSPA1LP34931 641 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 NAA30Q147X3 362 aaPredicted RBP7.99□□□□□ -1.13
CD46-211ENST00000464082 CDCA8Q53HL2 280 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 PAOXQ6QHF9 649 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 KNDC1Q76NI1 1749 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 SMG8Q8ND04 991 aaKnown RBP7.99□□□□□ -1.13
CD46-211ENST00000464082 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 SETD5Q9C0A6 1442 aa7.99□□□□□ -1.13
CD46-211ENST00000464082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
CD46-211ENST00000464082 ASXL1Q8IXJ9 1541 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 METP08581 1390 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 PHLPP1O60346 1717 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 SOX1O00570 391 aaPredicted RBP7.98□□□□□ -1.13
CD46-211ENST00000464082 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 PROSER2Q86WR7 435 aaPredicted RBP7.98□□□□□ -1.13
CD46-211ENST00000464082 AGBL5Q8NDL9 886 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.98□□□□□ -1.13
CD46-211ENST00000464082 ELP3Q9H9T3 547 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 SUGCTQ9HAC7 445 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 DZANK1Q9NVP4 752 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 PRKAG2Q9UGJ0 569 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 SALL4Q9UJQ4 1053 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 SOX13Q9UN79 622 aa7.98□□□□□ -1.13
CD46-211ENST00000464082 COL16A1Q07092 1604 aaPredicted RBP7.98□□□□□ -1.13
CD46-211ENST00000464082 RAB3GAP2Q9H2M9 1393 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 FAM135BQ49AJ0 1406 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 PRAG1Q86YV5 1406 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 NCOA3Q9Y6Q9 1424 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 NHSL1Q5SYE7 1610 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 PDE2AO00408 941 aaPredicted RBP7.97□□□□□ -1.13
CD46-211ENST00000464082 PPP1R15AO75807 674 aaPredicted RBP7.97□□□□□ -1.13
CD46-211ENST00000464082 USP11P51784 963 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 GATA6Q92908 595 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 MKNK1Q9BUB5 465 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 USP26Q9BXU7 913 aa7.97□□□□□ -1.13
CD46-211ENST00000464082 ZC3H7BQ9UGR2 993 aaKnown RBP7.97□□□□□ -1.13
CD46-211ENST00000464082 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.14
CD46-211ENST00000464082 KRTAP9-7A8MTY7 169 aa7.96□□□□□ -1.14
CD46-211ENST00000464082 MPHOSPH9Q99550 1183 aa7.96□□□□□ -1.14
CD46-211ENST00000464082 LRRC4CQ9HCJ2 640 aa7.96□□□□□ -1.14
CD46-211ENST00000464082 CYP4F12Q9HCS2 524 aa7.96□□□□□ -1.14
CD46-211ENST00000464082 RGPD8O14715 1765 aaPredicted RBP7.95□□□□□ -1.14
CD46-211ENST00000464082 DBX1A6NMT0 343 aa7.95□□□□□ -1.14
CD46-211ENST00000464082 ARL4DP49703 201 aa7.95□□□□□ -1.14
CD46-211ENST00000464082 VN1R5Q7Z5H4 357 aa7.95□□□□□ -1.14
CD46-211ENST00000464082 C1orf127Q8N9H9 656 aa7.95□□□□□ -1.14
CD46-211ENST00000464082 C2CD4AQ8NCU7 369 aaPredicted RBP7.95□□□□□ -1.14
CD46-211ENST00000464082 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
CD46-211ENST00000464082 NOVA2Q9UNW9 492 aaKnown RBP7.95□□□□□ -1.14
CD46-211ENST00000464082 LAMC1P11047 1609 aa7.95□□□□□ -1.14
CD46-211ENST00000464082 AHDC1Q5TGY3 1603 aaPredicted RBP7.95□□□□□ -1.14
CD46-211ENST00000464082 CCDC144AA2RUR9 1427 aa7.95□□□□□ -1.14
CD46-211ENST00000464082 NRXN1Q9ULB1 1477 aa7.94□□□□□ -1.14
CD46-211ENST00000464082 ZNF326Q5BKZ1 582 aaKnown RBP7.94□□□□□ -1.14
CD46-211ENST00000464082 CFAP70Q5T0N1 1121 aa7.94□□□□□ -1.14
CD46-211ENST00000464082 PDE12Q6L8Q7 609 aaKnown RBP7.94□□□□□ -1.14
CD46-211ENST00000464082 ZNF574Q6ZN55 896 aaPredicted RBP7.94□□□□□ -1.14
CD46-211ENST00000464082 AMOTL2Q9Y2J4 779 aa7.94□□□□□ -1.14
CD46-211ENST00000464082 SHPRHQ149N8 1683 aa7.94□□□□□ -1.14
CD46-211ENST00000464082 MSH6P52701 1360 aa7.94□□□□□ -1.14
CD46-211ENST00000464082 DISP3Q9P2K9 1392 aa7.94□□□□□ -1.14
CD46-211ENST00000464082 PTCH1Q13635 1447 aa7.94□□□□□ -1.14
CD46-211ENST00000464082 RFX1P22670 979 aa7.93□□□□□ -1.14
CD46-211ENST00000464082 ZNF438Q7Z4V0 828 aa7.93□□□□□ -1.14
CD46-211ENST00000464082 WFDC3Q8IUB2 231 aa7.93□□□□□ -1.14
CD46-211ENST00000464082 EZH1Q92800 747 aaPredicted RBP7.93□□□□□ -1.14
CD46-211ENST00000464082 NUDT16Q96DE0 195 aaKnown RBP7.93□□□□□ -1.14
CD46-211ENST00000464082 STIM2Q9P246 746 aa7.93□□□□□ -1.14
CD46-211ENST00000464082 ADGRF5Q8IZF2 1346 aa7.93□□□□□ -1.14
CD46-211ENST00000464082 PIK3C2GO75747 1445 aa7.93□□□□□ -1.14
CD46-211ENST00000464082 DCCP43146 1447 aa7.93□□□□□ -1.14
CD46-211ENST00000464082 CES1P23141 567 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 IKBKEQ14164 716 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 SWI5Q1ZZU3 235 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 ZNF765Q7L2R6 523 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 ATCAYQ86WG3 371 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 ACIN1Q9UKV3 1341 aaKnown RBP7.92□□□□□ -1.14
CD46-211ENST00000464082 ANKRD30BQ9BXX2 1392 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 ROBO2Q9HCK4 1378 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 MST1RQ04912 1400 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 ADGRL3Q9HAR2 1447 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 MYOM2P54296 1465 aa7.92□□□□□ -1.14
CD46-211ENST00000464082 SOX4Q06945 474 aaPredicted RBP7.91□□□□□ -1.14
CD46-211ENST00000464082 ZNF792Q3KQV3 632 aa7.91□□□□□ -1.14
CD46-211ENST00000464082 EXOSC6Q5RKV6 272 aaKnown RBP7.91□□□□□ -1.14
CD46-211ENST00000464082 SPRED2Q7Z698 418 aa7.91□□□□□ -1.14
CD46-211ENST00000464082 BCL7CQ8WUZ0 217 aaPredicted RBP7.91□□□□□ -1.14
CD46-211ENST00000464082 TECPR2O15040 1411 aa7.91□□□□□ -1.14
CD46-211ENST00000464082 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
CD46-211ENST00000464082 CDC42BPGQ6DT37 1551 aa7.9□□□□□ -1.14
CD46-211ENST00000464082 PLCL1Q15111 1095 aa7.9□□□□□ -1.14
CD46-211ENST00000464082 TMEM132AQ24JP5 1023 aa7.9□□□□□ -1.14
CD46-211ENST00000464082 DUSP27Q5VZP5 1158 aa7.9□□□□□ -1.14
CD46-211ENST00000464082 TMEM102Q8N9M5 508 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms