RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 TUBB2BQ9BVA1 445 aa8.02□□□□□ -1.13
CDKL5-203ENST00000463994 FRMD4BQ9Y2L6 1034 aa8.02□□□□□ -1.13
CDKL5-203ENST00000463994 GRIN2DO15399 1336 aa8.02□□□□□ -1.13
CDKL5-203ENST00000463994 A6NHS1 94 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 LRRC10BA6NIK2 292 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 MGRN1O60291 552 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 CUTAO60888 179 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 LINGO3P0C6S8 592 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 IFT88Q13099 833 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 ENOX2Q16206 610 aaKnown RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 RNF168Q8IYW5 571 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 THEMISQ8N1K5 641 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 TCP11L2Q8N4U5 519 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 HDAC6Q9UBN7 1215 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 ADGRB2O60241 1585 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 UBR1Q8IWV7 1749 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 VWA3AA6NCI4 1184 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 NPHP4O75161 1426 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 ZNF202O95125 648 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 SSBP05455 408 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 RPL13P26373 211 aaKnown RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 VSNL1P62760 191 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 BLMHQ13867 455 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 ACCSLQ4AC99 568 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 APBB1IPQ7Z5R6 666 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 TTC6Q86TZ1 520 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 IQCF2Q8IXL9 164 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 ELOA2Q8IYF1 753 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 ANKRD13AQ8IZ07 590 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 SYCP3Q8IZU3 236 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 HELBQ8NG08 1087 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-203ENST00000463994 TBC1D31Q96DN5 1066 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 MYO1AQ9UBC5 1043 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 MAPK8IP1Q9UQF2 711 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 ZNF510Q9Y2H8 683 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 WDR37Q9Y2I8 494 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 C15orf41Q9Y2V0 281 aa8.01□□□□□ -1.13
CDKL5-203ENST00000463994 CAPN15O75808 1086 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 LUC7L3O95232 432 aaKnown RBP8□□□□□ -1.13
CDKL5-203ENST00000463994 DESP17661 470 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 MYO1EQ12965 1108 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 PABPC4Q13310 644 aaKnown RBP eCLIP8□□□□□ -1.13
CDKL5-203ENST00000463994 DPY19L2Q6NUT2 758 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 CXorf38Q8TB03 319 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 HDAC7Q8WUI4 952 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 IL17RAQ96F46 866 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 CFAP53Q96M91 514 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 WDR24Q96S15 920 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 ZSWIM4Q9H7M6 989 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 RRP7AQ9Y3A4 280 aaKnown RBP8□□□□□ -1.13
CDKL5-203ENST00000463994 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 RAB11FIP3O75154 756 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 VIL1P09327 827 aaKnown RBP8□□□□□ -1.13
CDKL5-203ENST00000463994 ATP4AP20648 1035 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 MCM3P25205 808 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 STIM1Q13586 685 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 CRELD2Q6UXH1 353 aaPredicted RBP8□□□□□ -1.13
CDKL5-203ENST00000463994 C11orf57Q6ZUT1 292 aaPredicted RBP8□□□□□ -1.13
CDKL5-203ENST00000463994 SNRNP27Q8WVK2 155 aaKnown RBP8□□□□□ -1.13
CDKL5-203ENST00000463994 KIFC2Q96AC6 838 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 VTI1AQ96AJ9 217 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 SH3GL2Q99962 352 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 SCAND2PQ9GZW5 306 aaPredicted RBP8□□□□□ -1.13
CDKL5-203ENST00000463994 TRPV5Q9NQA5 729 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 MIS18AQ9NYP9 233 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 NSD2O96028 1365 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 KIF1BO60333 1816 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 NOS1P29475 1434 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 NSD3Q9BZ95 1437 aa8□□□□□ -1.13
CDKL5-203ENST00000463994 CYP27B1O15528 508 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 CEP104O60308 925 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 HMMRO75330 724 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 KBTBD12Q3ZCT8 623 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 CCDC92Q53HC0 331 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-203ENST00000463994 WDR93Q6P2C0 686 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 CCDC121Q6ZUS5 278 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 NME8Q8N427 588 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 GBP7Q8N8V2 638 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-203ENST00000463994 CCHCR1Q8TD31 782 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 DHRS1Q96LJ7 313 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 MTA3Q9BTC8 594 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 POLR3CQ9BUI4 534 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-203ENST00000463994 NUP58Q9BVL2 599 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 NACA2Q9H009 215 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 EHD4Q9H223 541 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 RABEP2Q9H5N1 569 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 ZFATQ9P243 1243 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 HPCAL4Q9UM19 191 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 PHF24Q9UPV7 400 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 MTMR6Q9Y217 621 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 ZBTB7BO15156 539 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-203ENST00000463994 CNGA1P29973 690 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 HSPA4P34932 840 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 CTCFP49711 727 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-203ENST00000463994 TMEM62Q0P6H9 643 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 SLC4A8Q2Y0W8 1093 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 TMEM110Q86TL2 294 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 DHX40Q8IX18 779 aaKnown RBP7.99□□□□□ -1.13
CDKL5-203ENST00000463994 SAMD3Q8N6K7 520 aa7.99□□□□□ -1.13
CDKL5-203ENST00000463994 SMYD1Q8NB12 490 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms