RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
CDKL5-203ENST00000463994 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
CDKL5-203ENST00000463994 MYT1Q01538 1121 aa12.59□□□□□ -0.39
CDKL5-203ENST00000463994 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
CDKL5-203ENST00000463994 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
CDKL5-203ENST00000463994 HRCP23327 699 aa12.02□□□□□ -0.49
CDKL5-203ENST00000463994 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.52
CDKL5-203ENST00000463994 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
CDKL5-203ENST00000463994 SCAF1Q9H7N4 1312 aaKnown RBP11.7□□□□□ -0.54
CDKL5-203ENST00000463994 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
CDKL5-203ENST00000463994 PRKCSHP14314 528 aaPredicted RBP11.6□□□□□ -0.55
CDKL5-203ENST00000463994 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
CDKL5-203ENST00000463994 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
CDKL5-203ENST00000463994 ERICH6Q7L0X2 663 aa11.48□□□□□ -0.57
CDKL5-203ENST00000463994 BCL11AQ9H165 835 aa11.48□□□□□ -0.57
CDKL5-203ENST00000463994 APLP2Q06481 763 aa11.36□□□□□ -0.59
CDKL5-203ENST00000463994 ABCC9O60706 1549 aa11.35□□□□□ -0.59
CDKL5-203ENST00000463994 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
CDKL5-203ENST00000463994 FAM9AQ8IZU1 332 aaPredicted RBP11.32□□□□□ -0.6
CDKL5-203ENST00000463994 CENPBP07199 599 aaPredicted RBP11.31□□□□□ -0.6
CDKL5-203ENST00000463994 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
CDKL5-203ENST00000463994 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
CDKL5-203ENST00000463994 AEBP2Q6ZN18 517 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-203ENST00000463994 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
CDKL5-203ENST00000463994 DAXXQ9UER7 740 aaPredicted RBP11.15□□□□□ -0.62
CDKL5-203ENST00000463994 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
CDKL5-203ENST00000463994 NEUROD1Q13562 356 aa11.12□□□□□ -0.63
CDKL5-203ENST00000463994 RB1CC1Q8TDY2 1594 aa11.1□□□□□ -0.63
CDKL5-203ENST00000463994 NACADO15069 1562 aa11.06□□□□□ -0.64
CDKL5-203ENST00000463994 ANP32EQ9BTT0 268 aa11.04□□□□□ -0.64
CDKL5-203ENST00000463994 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
CDKL5-203ENST00000463994 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
CDKL5-203ENST00000463994 DCAF1Q9Y4B6 1507 aa10.9□□□□□ -0.67
CDKL5-203ENST00000463994 KCNA4P22459 653 aa10.89□□□□□ -0.67
CDKL5-203ENST00000463994 TRIM26Q12899 539 aaPredicted RBP10.88□□□□□ -0.67
CDKL5-203ENST00000463994 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
CDKL5-203ENST00000463994 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
CDKL5-203ENST00000463994 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
CDKL5-203ENST00000463994 UNC13AQ9UPW8 1703 aa10.72□□□□□ -0.69
CDKL5-203ENST00000463994 PHF23Q9BUL5 403 aaPredicted RBP10.72□□□□□ -0.69
CDKL5-203ENST00000463994 ZCCHC6Q5VYS8 1495 aaKnown RBP10.71□□□□□ -0.69
CDKL5-203ENST00000463994 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.7
CDKL5-203ENST00000463994 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
CDKL5-203ENST00000463994 DIEXFQ68CQ4 756 aaKnown RBP10.67□□□□□ -0.7
CDKL5-203ENST00000463994 UBE2Q2Q8WVN8 375 aa10.66□□□□□ -0.7
CDKL5-203ENST00000463994 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.7
CDKL5-203ENST00000463994 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
CDKL5-203ENST00000463994 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
CDKL5-203ENST00000463994 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
CDKL5-203ENST00000463994 CLSPNQ9HAW4 1339 aa10.59□□□□□ -0.71
CDKL5-203ENST00000463994 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
CDKL5-203ENST00000463994 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
CDKL5-203ENST00000463994 MYT1LQ9UL68 1186 aa10.49□□□□□ -0.73
CDKL5-203ENST00000463994 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
CDKL5-203ENST00000463994 SUPT16HQ9Y5B9 1047 aaKnown RBP10.47□□□□□ -0.73
CDKL5-203ENST00000463994 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
CDKL5-203ENST00000463994 ARXQ96QS3 562 aa10.45□□□□□ -0.74
CDKL5-203ENST00000463994 SALL2Q9Y467 1007 aaPredicted RBP10.43□□□□□ -0.74
CDKL5-203ENST00000463994 DCAF8L2P0C7V8 631 aa10.42□□□□□ -0.74
CDKL5-203ENST00000463994 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDKL5-203ENST00000463994 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
CDKL5-203ENST00000463994 SCRIBQ14160 1630 aa10.41□□□□□ -0.74
CDKL5-203ENST00000463994 EIF4G1Q04637 1599 aaKnown RBP10.4□□□□□ -0.74
CDKL5-203ENST00000463994 TAOK2Q9UL54 1235 aa10.39□□□□□ -0.75
CDKL5-203ENST00000463994 PKNOX2Q96KN3 472 aa10.39□□□□□ -0.75
CDKL5-203ENST00000463994 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
CDKL5-203ENST00000463994 PLEKHG5O94827 1062 aa10.38□□□□□ -0.75
CDKL5-203ENST00000463994 LOC105371045A0A1W2PR82 267 aa10.37□□□□□ -0.75
CDKL5-203ENST00000463994 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
CDKL5-203ENST00000463994 CCDC136Q96JN2 1154 aa10.36□□□□□ -0.75
CDKL5-203ENST00000463994 PODXL2Q9NZ53 605 aa10.35□□□□□ -0.75
CDKL5-203ENST00000463994 CECR2Q9BXF3 1484 aa10.34□□□□□ -0.75
CDKL5-203ENST00000463994 DEKP35659 375 aaKnown RBP10.33□□□□□ -0.76
CDKL5-203ENST00000463994 ZNF316A6NFI3 1004 aaPredicted RBP10.31□□□□□ -0.76
CDKL5-203ENST00000463994 CCER1Q8TC90 406 aaPredicted RBP10.31□□□□□ -0.76
CDKL5-203ENST00000463994 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
CDKL5-203ENST00000463994 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
CDKL5-203ENST00000463994 MIER1Q8N108 512 aa10.28□□□□□ -0.76
CDKL5-203ENST00000463994 MSH5O43196 834 aa10.24□□□□□ -0.77
CDKL5-203ENST00000463994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
CDKL5-203ENST00000463994 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
CDKL5-203ENST00000463994 FANCIQ9NVI1 1328 aa10.19□□□□□ -0.78
CDKL5-203ENST00000463994 RANGAP1P46060 587 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-203ENST00000463994 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
CDKL5-203ENST00000463994 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
CDKL5-203ENST00000463994 NCAPD3P42695 1498 aa10.13□□□□□ -0.79
CDKL5-203ENST00000463994 SMARCA2P51531 1590 aa10.12□□□□□ -0.79
CDKL5-203ENST00000463994 NEFLP07196 543 aa10.12□□□□□ -0.79
CDKL5-203ENST00000463994 BCANQ96GW7 911 aa10.11□□□□□ -0.79
CDKL5-203ENST00000463994 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
CDKL5-203ENST00000463994 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
CDKL5-203ENST00000463994 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
CDKL5-203ENST00000463994 CUX2O14529 1486 aa10.08□□□□□ -0.8
CDKL5-203ENST00000463994 IL27Q8NEV9 243 aa10.08□□□□□ -0.8
CDKL5-203ENST00000463994 SMARCA4P51532 1647 aa10.06□□□□□ -0.8
CDKL5-203ENST00000463994 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-203ENST00000463994 ATAD2BQ9ULI0 1458 aa10.03□□□□□ -0.8
CDKL5-203ENST00000463994 FKBP8Q14318 412 aa10.03□□□□□ -0.8
CDKL5-203ENST00000463994 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
CDKL5-203ENST00000463994 ZMYND15Q9H091 742 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms